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authorMarc Glisse <marc.glisse@inria.fr>2019-12-26 19:30:04 +0100
committerMarc Glisse <marc.glisse@inria.fr>2019-12-26 19:30:04 +0100
commit003b33403ab92e25cab2b9e51b36528d5cc6112c (patch)
tree43d909e89883846ce0d3719e0ca210eb19b9f8b3
parent4922f305b7601d9e5d7eb39c73a88ee53bf1ca87 (diff)
Check for pybind11
-rw-r--r--.appveyor.yml2
-rw-r--r--.travis.yml2
-rw-r--r--src/cmake/modules/GUDHI_third_party_libraries.cmake1
-rw-r--r--src/python/CMakeLists.txt51
4 files changed, 31 insertions, 25 deletions
diff --git a/.appveyor.yml b/.appveyor.yml
index 4a76ea0a..3a33ed62 100644
--- a/.appveyor.yml
+++ b/.appveyor.yml
@@ -48,7 +48,7 @@ install:
- pip --version
- python -m pip install --upgrade pip
- pip install -U setuptools numpy matplotlib scipy Cython pytest
- - pip install -U POT
+ - pip install -U POT pybind11
build_script:
- mkdir build
diff --git a/.travis.yml b/.travis.yml
index d6c82e70..4b4c7068 100644
--- a/.travis.yml
+++ b/.travis.yml
@@ -59,7 +59,7 @@ before_cache:
install:
- python3 -m pip install --upgrade pip setuptools wheel
- python3 -m pip install --user pytest Cython sphinx sphinxcontrib-bibtex sphinx-paramlinks matplotlib numpy scipy scikit-learn
- - python3 -m pip install --user POT
+ - python3 -m pip install --user POT pybind11
script:
- rm -rf build
diff --git a/src/cmake/modules/GUDHI_third_party_libraries.cmake b/src/cmake/modules/GUDHI_third_party_libraries.cmake
index 24a34150..cb9f9033 100644
--- a/src/cmake/modules/GUDHI_third_party_libraries.cmake
+++ b/src/cmake/modules/GUDHI_third_party_libraries.cmake
@@ -127,6 +127,7 @@ if( PYTHONINTERP_FOUND )
find_python_module("sphinx")
find_python_module("sklearn")
find_python_module("ot")
+ find_python_module("pybind11")
endif()
if(NOT GUDHI_PYTHON_PATH)
diff --git a/src/python/CMakeLists.txt b/src/python/CMakeLists.txt
index bec38305..edb1ba02 100644
--- a/src/python/CMakeLists.txt
+++ b/src/python/CMakeLists.txt
@@ -407,32 +407,37 @@ endif(CGAL_FOUND)
if(SCIPY_FOUND)
if(SKLEARN_FOUND)
if(OT_FOUND)
- if(NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.11.0)
- set (GUDHI_SPHINX_MESSAGE "Generating API documentation with Sphinx in ${CMAKE_CURRENT_BINARY_DIR}/sphinx/")
- # User warning - Sphinx is a static pages generator, and configured to work fine with user_version
- # Images and biblio warnings because not found on developper version
- if (GUDHI_PYTHON_PATH STREQUAL "src/python")
- set (GUDHI_SPHINX_MESSAGE "${GUDHI_SPHINX_MESSAGE} \n WARNING : Sphinx is configured for user version, you run it on developper version. Images and biblio will miss")
- endif()
- # sphinx target requires gudhi.so, because conf.py reads gudhi version from it
- add_custom_target(sphinx
- WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}/doc
- COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
- ${SPHINX_PATH} -b html ${CMAKE_CURRENT_SOURCE_DIR}/doc ${CMAKE_CURRENT_BINARY_DIR}/sphinx
- DEPENDS "${CMAKE_CURRENT_BINARY_DIR}/gudhi.so"
- COMMENT "${GUDHI_SPHINX_MESSAGE}" VERBATIM)
+ if(PYBIND11_FOUND)
+ if(NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.11.0)
+ set (GUDHI_SPHINX_MESSAGE "Generating API documentation with Sphinx in ${CMAKE_CURRENT_BINARY_DIR}/sphinx/")
+ # User warning - Sphinx is a static pages generator, and configured to work fine with user_version
+ # Images and biblio warnings because not found on developper version
+ if (GUDHI_PYTHON_PATH STREQUAL "src/python")
+ set (GUDHI_SPHINX_MESSAGE "${GUDHI_SPHINX_MESSAGE} \n WARNING : Sphinx is configured for user version, you run it on developper version. Images and biblio will miss")
+ endif()
+ # sphinx target requires gudhi.so, because conf.py reads gudhi version from it
+ add_custom_target(sphinx
+ WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}/doc
+ COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+ ${SPHINX_PATH} -b html ${CMAKE_CURRENT_SOURCE_DIR}/doc ${CMAKE_CURRENT_BINARY_DIR}/sphinx
+ DEPENDS "${CMAKE_CURRENT_BINARY_DIR}/gudhi.so"
+ COMMENT "${GUDHI_SPHINX_MESSAGE}" VERBATIM)
- add_test(NAME sphinx_py_test
- WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
- COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
- ${SPHINX_PATH} -b doctest ${CMAKE_CURRENT_SOURCE_DIR}/doc ${CMAKE_CURRENT_BINARY_DIR}/doctest)
+ add_test(NAME sphinx_py_test
+ WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+ ${SPHINX_PATH} -b doctest ${CMAKE_CURRENT_SOURCE_DIR}/doc ${CMAKE_CURRENT_BINARY_DIR}/doctest)
- # Set missing or not modules
- set(GUDHI_MODULES ${GUDHI_MODULES} "python-documentation" CACHE INTERNAL "GUDHI_MODULES")
- else(NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.11.0)
- message("++ Python documentation module will not be compiled because it requires a Eigen3 and CGAL version >= 4.11.0")
+ # Set missing or not modules
+ set(GUDHI_MODULES ${GUDHI_MODULES} "python-documentation" CACHE INTERNAL "GUDHI_MODULES")
+ else(NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.11.0)
+ message("++ Python documentation module will not be compiled because it requires a Eigen3 and CGAL version >= 4.11.0")
+ set(GUDHI_MISSING_MODULES ${GUDHI_MISSING_MODULES} "python-documentation" CACHE INTERNAL "GUDHI_MISSING_MODULES")
+ endif(NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.11.0)
+ else(PYBIND11_FOUND)
+ message("++ Python documentation module will not be compiled because pybind11 was not found")
set(GUDHI_MISSING_MODULES ${GUDHI_MISSING_MODULES} "python-documentation" CACHE INTERNAL "GUDHI_MISSING_MODULES")
- endif(NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.11.0)
+ endif(PYBIND11_FOUND)
else(OT_FOUND)
message("++ Python documentation module will not be compiled because POT was not found")
set(GUDHI_MISSING_MODULES ${GUDHI_MISSING_MODULES} "python-documentation" CACHE INTERNAL "GUDHI_MISSING_MODULES")