diff options
author | Hind-M <hind.montassif@gmail.com> | 2022-06-16 15:54:21 +0200 |
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committer | Hind-M <hind.montassif@gmail.com> | 2022-06-16 15:54:21 +0200 |
commit | 868369dd61fb6ef475ffa3af724907927121b6bb (patch) | |
tree | 694101237cfd843fb9869369190c5bee4f840ca6 /src/Cech_complex/benchmark/cech_complex_benchmark.cpp | |
parent | c624cb2c4de0acc7ac9b96c20ab0db499c8d96a8 (diff) |
Add exact option for exact cech variant
Diffstat (limited to 'src/Cech_complex/benchmark/cech_complex_benchmark.cpp')
-rw-r--r-- | src/Cech_complex/benchmark/cech_complex_benchmark.cpp | 22 |
1 files changed, 14 insertions, 8 deletions
diff --git a/src/Cech_complex/benchmark/cech_complex_benchmark.cpp b/src/Cech_complex/benchmark/cech_complex_benchmark.cpp index d2a71879..19142780 100644 --- a/src/Cech_complex/benchmark/cech_complex_benchmark.cpp +++ b/src/Cech_complex/benchmark/cech_complex_benchmark.cpp @@ -31,7 +31,7 @@ using Points_off_reader = Gudhi::Points_off_reader<Point>; using Rips_complex = Gudhi::rips_complex::Rips_complex<Filtration_value>; template<typename Kernel> -Simplex_tree benchmark_cech(const std::string& off_file_points, const Filtration_value& radius, const int& dim_max) { +Simplex_tree benchmark_cech(const std::string& off_file_points, const Filtration_value& radius, const int& dim_max, const bool exact) { using Point_cgal = typename Kernel::Point_d; using Points_off_reader_cgal = Gudhi::Points_off_reader<Point_cgal>; using Cech_complex = Gudhi::cech_complex::Cech_complex<Kernel, Simplex_tree>; @@ -42,7 +42,7 @@ Simplex_tree benchmark_cech(const std::string& off_file_points, const Filtration Gudhi::Clock cech_clock("Cech computation"); Cech_complex cech_complex_from_points(off_reader_cgal.get_point_cloud(), radius); Simplex_tree cech_stree; - cech_complex_from_points.create_complex(cech_stree, dim_max); + cech_complex_from_points.create_complex(cech_stree, dim_max, exact); // ------------------------------------------ // Display information about the Cech complex @@ -56,8 +56,9 @@ int main(int argc, char* argv[]) { boost::filesystem::path full_path(boost::filesystem::current_path()); std::clog << "Current path is : " << full_path << std::endl; - std::clog << "File name ; Radius ; Rips time ; Dim-3 Epick Cech time ; Dynamic_dim Epick Cech time ; " - "Dim-3 Epeck Cech time ; Dynamic_dim Epeck Cech time ; Cech nb simplices ; Rips nb simplices;" + std::clog << "File name ; Radius ; Rips time ; Dim-3 Fast Cech time ; Dynamic_dim Fast Cech time ; " + "Dim-3 Safe Cech time ; Dynamic_dim Safe Cech time ; Dim-3 Exact Cech time ; Dynamic_dim Exact Cech time ; " + "Cech nb simplices ; Rips nb simplices;" << std::endl; boost::filesystem::directory_iterator end_itr; // default construction yields past-the-end for (boost::filesystem::directory_iterator itr(boost::filesystem::current_path()); itr != end_itr; ++itr) { @@ -83,10 +84,15 @@ int main(int argc, char* argv[]) { // -------------- // Cech complex // -------------- - benchmark_cech<CGAL::Epick_d<CGAL::Dimension_tag<3>>>(itr->path().string(), radius, p0.size() - 1); - benchmark_cech<CGAL::Epick_d<CGAL::Dynamic_dimension_tag>>(itr->path().string(), radius, p0.size() - 1); - benchmark_cech<CGAL::Epeck_d<CGAL::Dimension_tag<3>>>(itr->path().string(), radius, p0.size() - 1); - auto cech_stree = benchmark_cech<CGAL::Epeck_d<CGAL::Dynamic_dimension_tag>>(itr->path().string(), radius, p0.size() - 1); + // Fast + benchmark_cech<CGAL::Epick_d<CGAL::Dimension_tag<3>>>(itr->path().string(), radius, p0.size() - 1, false); + benchmark_cech<CGAL::Epick_d<CGAL::Dynamic_dimension_tag>>(itr->path().string(), radius, p0.size() - 1, false); + // Safe + benchmark_cech<CGAL::Epeck_d<CGAL::Dimension_tag<3>>>(itr->path().string(), radius, p0.size() - 1, false); + benchmark_cech<CGAL::Epeck_d<CGAL::Dynamic_dimension_tag>>(itr->path().string(), radius, p0.size() - 1, false); + // Exact + benchmark_cech<CGAL::Epeck_d<CGAL::Dimension_tag<3>>>(itr->path().string(), radius, p0.size() - 1, true); + auto cech_stree = benchmark_cech<CGAL::Epeck_d<CGAL::Dynamic_dimension_tag>>(itr->path().string(), radius, p0.size() - 1, true); std::clog << cech_stree.num_simplices() << " ; "; std::clog << rips_stree.num_simplices() << ";" << std::endl; |