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authorvrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb>2017-05-30 15:52:00 +0000
committervrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb>2017-05-30 15:52:00 +0000
commit9d1a526de85694b5f075bb88dbd7097a40abf10a (patch)
treebbcd0cef32610d2f5e9c0209b48c58f73fbf379a /src/Persistence_representations/utilities/persistence_heat_maps/create_pssk.cpp
parent2bcb3d7cb47ce71803f2464cc822346ed2e1b039 (diff)
clang format all sources
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2477 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 326d664483d6700f82be824f79a0bf5c082b4945
Diffstat (limited to 'src/Persistence_representations/utilities/persistence_heat_maps/create_pssk.cpp')
-rw-r--r--src/Persistence_representations/utilities/persistence_heat_maps/create_pssk.cpp96
1 files changed, 46 insertions, 50 deletions
diff --git a/src/Persistence_representations/utilities/persistence_heat_maps/create_pssk.cpp b/src/Persistence_representations/utilities/persistence_heat_maps/create_pssk.cpp
index 6a07bf19..6b464378 100644
--- a/src/Persistence_representations/utilities/persistence_heat_maps/create_pssk.cpp
+++ b/src/Persistence_representations/utilities/persistence_heat_maps/create_pssk.cpp
@@ -22,63 +22,59 @@
#include <gudhi/PSSK.h>
-
-
using namespace Gudhi;
using namespace Gudhi::Persistence_representations;
#include <iostream>
#include <sstream>
+int main(int argc, char** argv) {
+ std::cout << "This program creates PSSK of diagrams provided as an input.\n";
+ std::cout << "The first parameter of a program is an integer, a size of a grid.\n";
+ std::cout << "The second and third parameters are min and max of the grid. If you want those numbers to be computed "
+ "based on the data, set them both to -1 \n";
+ std::cerr << "The fourth parameter is an integer, the standard deviation of a Gaussian kernel expressed in a number "
+ "of pixels \n";
+ std::cout << "The fifth parameter of this program is a dimension of persistence that will be used in creation of the "
+ "persistence heat maps.";
+ std::cout << "If our input files contain persistence pairs of various dimension, as a fifth parameter of the "
+ "procedure please provide the dimension of persistence you want to use.";
+ std::cout << "If in your file there are only birth-death pairs of the same dimension, set the first parameter to -1."
+ << std::endl;
+ std::cout << "The remaining parameters are the names of files with persistence diagrams. \n";
+
+ if (argc < 5) {
+ std::cout << "Wrong parameter list, the program will now terminate \n";
+ return 1;
+ }
+
+ size_t size_of_grid = (size_t)atoi(argv[1]);
+ double min_ = atof(argv[2]);
+ double max_ = atof(argv[3]);
+ size_t stdiv = atof(argv[4]);
+
+ unsigned dimension = std::numeric_limits<unsigned>::max();
+ int dim = atoi(argv[5]);
+ if (dim >= 0) {
+ dimension = (unsigned)dim;
+ }
+
+ std::vector<const char*> filenames;
+ for (int i = 6; i < argc; ++i) {
+ filenames.push_back(argv[i]);
+ }
+ std::cout << "Creating persistence heat maps...\n";
+ std::vector<std::vector<double> > filter = create_Gaussian_filter(stdiv, 1);
-int main( int argc , char** argv )
-{
- std::cout << "This program creates PSSK of diagrams provided as an input.\n";
- std::cout << "The first parameter of a program is an integer, a size of a grid.\n";
- std::cout << "The second and third parameters are min and max of the grid. If you want those numbers to be computed based on the data, set them both to -1 \n";
- std::cerr << "The fourth parameter is an integer, the standard deviation of a Gaussian kernel expressed in a number of pixels \n";
- std::cout << "The fifth parameter of this program is a dimension of persistence that will be used in creation of the persistence heat maps.";
- std::cout << "If our input files contain persistence pairs of various dimension, as a fifth parameter of the procedure please provide the dimension of persistence you want to use.";
- std::cout << "If in your file there are only birth-death pairs of the same dimension, set the first parameter to -1." << std::endl;
- std::cout << "The remaining parameters are the names of files with persistence diagrams. \n";
+ for (size_t i = 0; i != filenames.size(); ++i) {
+ std::cout << "Creating a heat map based on a file : " << filenames[i] << std::endl;
+ PSSK l(filenames[i], filter, size_of_grid, min_, max_, dimension);
- if ( argc < 5 )
- {
- std::cout << "Wrong parameter list, the program will now terminate \n";
- return 1;
- }
-
- size_t size_of_grid = (size_t)atoi( argv[1] );
- double min_ = atof( argv[2] );
- double max_ = atof( argv[3] );
- size_t stdiv = atof( argv[4] );
-
- unsigned dimension = std::numeric_limits<unsigned>::max();
- int dim = atoi( argv[5] );
- if ( dim >= 0 )
- {
- dimension = (unsigned)dim;
- }
-
- std::vector< const char* > filenames;
- for ( int i = 6 ; i < argc ; ++i )
- {
- filenames.push_back( argv[i] );
- }
-
- std::cout << "Creating persistence heat maps...\n";
- std::vector< std::vector<double> > filter = create_Gaussian_filter(stdiv,1);
-
- for ( size_t i = 0 ; i != filenames.size() ; ++i )
- {
- std::cout << "Creating a heat map based on a file : " << filenames[i] << std::endl;
- PSSK l( filenames[i] , filter , size_of_grid , min_ , max_ , dimension );
-
- std::stringstream ss;
- ss << filenames[i] << ".pssk";
- l.print_to_file( ss.str().c_str() );
- }
- std::cout << "Done \n";
- return 0;
+ std::stringstream ss;
+ ss << filenames[i] << ".pssk";
+ l.print_to_file(ss.str().c_str());
+ }
+ std::cout << "Done \n";
+ return 0;
}