summaryrefslogtreecommitdiff
path: root/src/Rips_complex/example
diff options
context:
space:
mode:
authorvrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb>2016-10-03 15:17:04 +0000
committervrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb>2016-10-03 15:17:04 +0000
commit5ce7c7c8ec1378439cdc02dc94ac2a7e14e9ca04 (patch)
treee5dab0473590126a3a5864fe7ebc11720c26bd26 /src/Rips_complex/example
parent29499b02d1b6eafcc6419a0b6b4469152ea20a09 (diff)
Fix euclidean distance for rips
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_module@1610 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a07dfd4ffe3f17bf242ffb5b57058e99171a8016
Diffstat (limited to 'src/Rips_complex/example')
-rw-r--r--src/Rips_complex/example/example_one_skeleton_rips_from_points.cpp9
-rw-r--r--src/Rips_complex/example/example_rips_complex_from_off_file.cpp5
2 files changed, 8 insertions, 6 deletions
diff --git a/src/Rips_complex/example/example_one_skeleton_rips_from_points.cpp b/src/Rips_complex/example/example_one_skeleton_rips_from_points.cpp
index db41b425..2e63d9a6 100644
--- a/src/Rips_complex/example/example_one_skeleton_rips_from_points.cpp
+++ b/src/Rips_complex/example/example_one_skeleton_rips_from_points.cpp
@@ -23,8 +23,9 @@ int main(int argc, char **argv) {
// Type definitions
using Point = std::vector<double>;
- using Simplex_tree = Gudhi::Simplex_tree<>;
- using Rips_complex = Gudhi::rips_complex::Rips_complex<Simplex_tree::Filtration_value>;
+ using Simplex_tree = Gudhi::Simplex_tree<Gudhi::Simplex_tree_options_fast_persistence>;
+ using Filtration_value = Simplex_tree::Filtration_value;
+ using Rips_complex = Gudhi::rips_complex::Rips_complex<Filtration_value>;
std::vector<Point> points;
points.push_back({1.0, 1.0});
@@ -38,10 +39,10 @@ int main(int argc, char **argv) {
// ----------------------------------------------------------------------------
// Init of a rips complex from points
// ----------------------------------------------------------------------------
- Rips_complex rips_complex_from_file(points, threshold, euclidean_distance<Point>);
+ Rips_complex rips_complex_from_points(points, threshold, euclidean_distance<Filtration_value, Point>);
Simplex_tree simplex;
- if (rips_complex_from_file.create_complex(simplex, 1)) {
+ if (rips_complex_from_points.create_complex(simplex, 1)) {
// ----------------------------------------------------------------------------
// Display information about the one skeleton rips complex
// ----------------------------------------------------------------------------
diff --git a/src/Rips_complex/example/example_rips_complex_from_off_file.cpp b/src/Rips_complex/example/example_rips_complex_from_off_file.cpp
index 82baa68e..60050cea 100644
--- a/src/Rips_complex/example/example_rips_complex_from_off_file.cpp
+++ b/src/Rips_complex/example/example_rips_complex_from_off_file.cpp
@@ -25,14 +25,15 @@ int main(int argc, char **argv) {
// Type definitions
using Point = std::vector<float>;
using Simplex_tree = Gudhi::Simplex_tree<>;
- using Rips_complex = Gudhi::rips_complex::Rips_complex<Simplex_tree::Filtration_value>;
+ using Filtration_value = Simplex_tree::Filtration_value;
+ using Rips_complex = Gudhi::rips_complex::Rips_complex<Filtration_value>;
// ----------------------------------------------------------------------------
// Init of a rips complex from an OFF file
// ----------------------------------------------------------------------------
Gudhi::Points_off_reader<Point> off_reader(off_file_name);
Rips_complex rips_complex_from_file(off_reader.get_point_cloud(), threshold,
- euclidean_distance<Point>);
+ euclidean_distance<Filtration_value, Point>);
std::streambuf* streambufffer;
std::ofstream ouput_file_stream;