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authorvrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb>2018-08-24 07:39:49 +0000
committervrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb>2018-08-24 07:39:49 +0000
commitaf065fc6d2d4771485118bb5122b3d5203b367ed (patch)
tree5557f7e3d265a8ba9ccfd8876e5a78c148707b52 /src/Simplex_tree
parentad82d011d06c22ce77817ab4606bd0e15663a145 (diff)
Fix move constructor and assignment for the Simplex tree
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/simplex_tree_fix_vincent@3831 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ff520472b6a1b9f00d0688fbe7dc467af50e16fe
Diffstat (limited to 'src/Simplex_tree')
-rw-r--r--src/Simplex_tree/include/gudhi/Simplex_tree.h64
-rw-r--r--src/Simplex_tree/test/simplex_tree_ctor_and_move_unit_test.cpp59
2 files changed, 94 insertions, 29 deletions
diff --git a/src/Simplex_tree/include/gudhi/Simplex_tree.h b/src/Simplex_tree/include/gudhi/Simplex_tree.h
index 4759b352..8e0ddf75 100644
--- a/src/Simplex_tree/include/gudhi/Simplex_tree.h
+++ b/src/Simplex_tree/include/gudhi/Simplex_tree.h
@@ -298,11 +298,11 @@ class Simplex_tree {
/** \brief User-defined copy constructor reproduces the whole tree structure. */
Simplex_tree(const Simplex_tree& simplex_source)
: null_vertex_(simplex_source.null_vertex_),
- root_(nullptr, null_vertex_ , simplex_source.root_.members_),
+ root_(nullptr, null_vertex_, simplex_source.root_.members_),
filtration_vect_(),
dimension_(simplex_source.dimension_) {
#ifdef DEBUG_TRACES
- std::cout << "copy constructor" << std::endl;
+ std::cout << "Simplex_tree copy constructor" << std::endl;
#endif // DEBUG_TRACES
auto root_source = simplex_source.root_;
rec_copy(&root_, &root_source);
@@ -323,17 +323,29 @@ class Simplex_tree {
}
}
- /** \brief User-defined move constructor moves the whole tree structure. */
- Simplex_tree(Simplex_tree && old)
- : null_vertex_(std::move(old.null_vertex_)),
- root_(std::move(old.root_)),
- filtration_vect_(std::move(old.filtration_vect_)),
- dimension_(std::move(old.dimension_)) {
+ /** \brief User-defined move constructor relocates the whole tree structure.
+ * \exception std::invalid_argument In debug mode, if the simplex_source is invalid.
+ */
+ Simplex_tree(Simplex_tree && simplex_source)
+ : null_vertex_(std::move(simplex_source.null_vertex_)),
+ root_(std::move(simplex_source.root_)),
+ filtration_vect_(std::move(simplex_source.filtration_vect_)),
+ dimension_(std::move(simplex_source.dimension_)) {
#ifdef DEBUG_TRACES
- std::cout << "move constructor" << std::endl;
+ std::cout << "Simplex_tree move constructor" << std::endl;
#endif // DEBUG_TRACES
- old.dimension_ = -1;
- old.root_ = Siblings(nullptr, null_vertex_);
+ for (auto& map_el : root_.members()) {
+ if (map_el.second.children()->oncles() == &(simplex_source.root_))
+ // reset with the moved root_ pointer value
+ map_el.second.children()->oncles_ = &root_;
+ else
+ // if simplex is of dimension 0, oncles_ shall be nullptr
+ GUDHI_CHECK(map_el.second.children()->oncles_ == nullptr,
+ std::invalid_argument("Simplex_tree move constructor from an invalid Simplex_tree"));
+ }
+ // just need to set dimension_ on source to make it available again
+ // (filtration_vect_ and members are already set from the move)
+ simplex_source.dimension_ = -1;
}
/** \brief Destructor; deallocates the whole tree structure. */
@@ -351,16 +363,24 @@ class Simplex_tree {
#ifdef DEBUG_TRACES
std::cout << "copy assignment" << std::endl;
#endif // DEBUG_TRACES
- this->null_vertex_ = simplex_source.null_vertex_;
- root_ = Siblings(nullptr, null_vertex_ , simplex_source.root_.members_);
- this->filtration_vect_.clear();
- this->dimension_ = simplex_source.dimension_;
+ null_vertex_ = simplex_source.null_vertex_;
+ filtration_vect_.clear();
+ dimension_ = simplex_source.dimension_;
auto root_source = simplex_source.root_;
- rec_copy(&(this->root_), &root_source);
+ // Here a copy will be done
+ root_ = Siblings(nullptr, null_vertex_);
+ root_.members() = Dictionary(boost::container::ordered_unique_range, root_source.members().begin(), root_source.members().end());
+ // Needs to reassign children
+ for (auto& map_el : root_.members()) {
+ map_el.second.assign_children(&root_);
+ }
+ rec_copy(&root_, &root_source);
return *this;
}
- /** \brief User-defined move assignment reproduces the whole tree structure. */
+ /** \brief User-defined move assignment relocates the whole tree structure.
+ * \exception std::invalid_argument In debug mode, if the simplex_source is invalid.
+ */
Simplex_tree& operator=(Simplex_tree&& simplex_source)
{
#ifdef DEBUG_TRACES
@@ -372,6 +392,16 @@ class Simplex_tree {
std::swap( root_, simplex_source.root_ );
std::swap( filtration_vect_, simplex_source.filtration_vect_ );
std::swap( dimension_, simplex_source.dimension_ );
+
+ for (auto& map_el : root_.members()) {
+ if (map_el.second.children()->oncles() == &(simplex_source.root_))
+ // reset with the moved root_ pointer value
+ map_el.second.children()->oncles_ = &root_;
+ else
+ // if simplex is of dimension 0, oncles_ shall be nullptr
+ GUDHI_CHECK(map_el.second.children()->oncles_ == nullptr,
+ std::invalid_argument("Simplex_tree move constructor from an invalid Simplex_tree"));
+ }
}
return *this;
}
diff --git a/src/Simplex_tree/test/simplex_tree_ctor_and_move_unit_test.cpp b/src/Simplex_tree/test/simplex_tree_ctor_and_move_unit_test.cpp
index 15eaf612..95e99afe 100644
--- a/src/Simplex_tree/test/simplex_tree_ctor_and_move_unit_test.cpp
+++ b/src/Simplex_tree/test/simplex_tree_ctor_and_move_unit_test.cpp
@@ -1,5 +1,6 @@
#include <iostream>
#include <vector>
+#include <string>
#define BOOST_TEST_DYN_LINK
#define BOOST_TEST_MODULE "simplex_tree_constructor_and_move"
@@ -14,38 +15,58 @@ using namespace Gudhi;
typedef boost::mpl::list<Simplex_tree<>, Simplex_tree<Simplex_tree_options_fast_persistence>> list_of_tested_variants;
-template<class SimplicialComplex>
-SimplicialComplex move_it(SimplicialComplex sc) {
- return sc;
-}
+template<typename Simplex_tree>
+void print_simplex_filtration(Simplex_tree& st, const std::string& msg) {
+ // Required before browsing through filtration values
+ st.initialize_filtration();
+
+ std::cout << "********************************************************************\n";
+ std::cout << "* " << msg << "\n";
+ std::cout << "* The complex contains " << st.num_simplices() << " simplices";
+ std::cout << " - dimension " << st.dimension() << "\n";
+ std::cout << "* Iterator on Simplices in the filtration, with [filtration value]:\n";
+ for (auto f_simplex : st.filtration_simplex_range()) {
+ std::cout << " "
+ << "[" << st.filtration(f_simplex) << "] ";
+ for (auto vertex : st.simplex_vertex_range(f_simplex)) std::cout << "(" << vertex << ")";
+ std::cout << std::endl;
+ }
+}
BOOST_AUTO_TEST_CASE_TEMPLATE(simplex_copy_constructor, Simplex_tree, list_of_tested_variants) {
- std::cout << "********************************************************************" << std::endl;
- std::cout << "TEST OF COPY CONSTRUCTOR" << std::endl;
Simplex_tree st;
st.insert_simplex_and_subfaces({2, 1, 0}, 3.0);
st.insert_simplex_and_subfaces({0, 1, 6, 7}, 4.0);
st.insert_simplex_and_subfaces({3, 0}, 2.0);
st.insert_simplex_and_subfaces({3, 4, 5}, 3.0);
+ st.insert_simplex_and_subfaces({8}, 1.0);
/* Inserted simplex: */
/* 1 6 */
/* o---o */
/* /X\7/ */
- /* o---o---o---o */
- /* 2 0 3\X/4 */
+ /* o---o---o---o o */
+ /* 2 0 3\X/4 8 */
/* o */
/* 5 */
/* */
/* In other words: */
- /* A facet [2,1,0] */
- /* An edge [0,3] */
- /* A facet [3,4,5] */
- /* A cell [0,1,6,7] */
+ /* A facet [2,1,0] */
+ /* An edge [0,3] */
+ /* A facet [3,4,5] */
+ /* A cell [0,1,6,7] */
+ /* A vertex [8] */
+
+ print_simplex_filtration(st, "Default Simplex_tree is initialized");
+
+ std::cout << "********************************************************************" << std::endl;
+ std::cout << "TEST OF COPY CONSTRUCTOR" << std::endl;
Simplex_tree st1(st);
Simplex_tree st2(st);
+ print_simplex_filtration(st1, "First copy constructor from the default Simplex_tree");
+ print_simplex_filtration(st2, "Second copy constructor from the default Simplex_tree");
// Cross check
BOOST_CHECK(st1 == st2);
BOOST_CHECK(st == st2);
@@ -55,8 +76,11 @@ BOOST_AUTO_TEST_CASE_TEMPLATE(simplex_copy_constructor, Simplex_tree, list_of_te
std::cout << "TEST OF COPY ASSIGNMENT" << std::endl;
Simplex_tree st3;
st3 = st;
+ print_simplex_filtration(st3, "First copy assignment from the default Simplex_tree");
Simplex_tree st4;
st4 = st;
+ print_simplex_filtration(st4, "Second copy assignment from the default Simplex_tree");
+
// Cross check
BOOST_CHECK(st3 == st4);
BOOST_CHECK(st == st4);
@@ -65,18 +89,29 @@ BOOST_AUTO_TEST_CASE_TEMPLATE(simplex_copy_constructor, Simplex_tree, list_of_te
std::cout << "********************************************************************" << std::endl;
std::cout << "TEST OF MOVE CONSTRUCTOR" << std::endl;
Simplex_tree st5(std::move(st1));
+ print_simplex_filtration(st5, "First move constructor from the default Simplex_tree");
+ print_simplex_filtration(st1, "First moved Simplex_tree shall be empty");
Simplex_tree st6(std::move(st2));
+ print_simplex_filtration(st6, "Second move constructor from the default Simplex_tree");
+ print_simplex_filtration(st2, "Second moved Simplex_tree shall be empty");
// Cross check
BOOST_CHECK(st5 == st6);
BOOST_CHECK(st == st6);
BOOST_CHECK(st5 == st);
+ Simplex_tree empty_st;
+ BOOST_CHECK(st1 == st2);
+ BOOST_CHECK(empty_st == st2);
+ BOOST_CHECK(st1 == empty_st);
+
std::cout << "********************************************************************" << std::endl;
std::cout << "TEST OF MOVE ASSIGNMENT" << std::endl;
// A swap is a copy ctor of a tmp value, then it uses move assignment
std::swap(st3, st4);
+ print_simplex_filtration(st3, "First move assignment from the default Simplex_tree");
+ print_simplex_filtration(st4, "Second move assignment from the default Simplex_tree");
BOOST_CHECK(st3 == st4);
BOOST_CHECK(st == st4);
BOOST_CHECK(st3 == st);