summaryrefslogtreecommitdiff
path: root/src/Simplex_tree
diff options
context:
space:
mode:
authorROUVREAU Vincent <vincent.rouvreau@inria.fr>2020-03-22 10:25:27 +0100
committerROUVREAU Vincent <vincent.rouvreau@inria.fr>2020-03-22 10:25:27 +0100
commitbb6f10aff11e05baec2d2d10c544a2ea1c302bc6 (patch)
tree665b6fcbdf6c951d31206852a2d356ef103ada18 /src/Simplex_tree
parentf78d65f0bd6aaf5f92639e2b809e1711acf929f7 (diff)
parent2ec0ac1f006577d520accbe605a61fc10ede3352 (diff)
Merge master and fix conflicts
Diffstat (limited to 'src/Simplex_tree')
-rw-r--r--src/Simplex_tree/example/simple_simplex_tree.cpp1
-rw-r--r--src/Simplex_tree/include/gudhi/Simplex_tree.h94
-rw-r--r--src/Simplex_tree/include/gudhi/Simplex_tree/Simplex_tree_iterators.h12
-rw-r--r--src/Simplex_tree/test/CMakeLists.txt6
-rw-r--r--src/Simplex_tree/test/simplex_tree_make_filtration_non_decreasing_unit_test.cpp148
-rw-r--r--src/Simplex_tree/test/simplex_tree_unit_test.cpp120
6 files changed, 273 insertions, 108 deletions
diff --git a/src/Simplex_tree/example/simple_simplex_tree.cpp b/src/Simplex_tree/example/simple_simplex_tree.cpp
index ca39df5b..e8bec596 100644
--- a/src/Simplex_tree/example/simple_simplex_tree.cpp
+++ b/src/Simplex_tree/example/simple_simplex_tree.cpp
@@ -166,7 +166,6 @@ int main(int argc, char* const argv[]) {
// ++ GENERAL VARIABLE SET
std::clog << "********************************************************************\n";
- // Display the Simplex_tree - Can not be done in the middle of 2 inserts
std::clog << "* The complex contains " << simplexTree.num_simplices() << " simplices\n";
std::clog << " - dimension " << simplexTree.dimension() << "\n";
std::clog << "* Iterator on Simplices in the filtration, with [filtration value]:\n";
diff --git a/src/Simplex_tree/include/gudhi/Simplex_tree.h b/src/Simplex_tree/include/gudhi/Simplex_tree.h
index 6e80b77f..430d1ac4 100644
--- a/src/Simplex_tree/include/gudhi/Simplex_tree.h
+++ b/src/Simplex_tree/include/gudhi/Simplex_tree.h
@@ -24,6 +24,7 @@
#include <boost/iterator/transform_iterator.hpp>
#include <boost/graph/adjacency_list.hpp>
#include <boost/range/adaptor/reversed.hpp>
+#include <boost/container/static_vector.hpp>
#ifdef GUDHI_USE_TBB
#include <tbb/parallel_sort.h>
@@ -246,8 +247,8 @@ class Simplex_tree {
* which is consequenlty
* equal to \f$(-1)^{\text{dim} \sigma}\f$ the canonical orientation on the simplex.
*/
- Simplex_vertex_range simplex_vertex_range(Simplex_handle sh) {
- assert(sh != null_simplex()); // Empty simplex
+ Simplex_vertex_range simplex_vertex_range(Simplex_handle sh) const {
+ GUDHI_CHECK(sh != null_simplex(), "empty simplex");
return Simplex_vertex_range(Simplex_vertex_iterator(this, sh),
Simplex_vertex_iterator(this));
}
@@ -450,6 +451,15 @@ class Simplex_tree {
return true;
}
+ /** \brief Returns the filtration value of a simplex.
+ *
+ * Same as `filtration()`, but does not handle `null_simplex()`.
+ */
+ static Filtration_value filtration_(Simplex_handle sh) {
+ GUDHI_CHECK (sh != null_simplex(), "null simplex");
+ return sh->second.filtration();
+ }
+
public:
/** \brief Returns the key associated to a simplex.
*
@@ -755,12 +765,7 @@ class Simplex_tree {
if (first == last)
return { null_simplex(), true }; // FIXME: false would make more sense to me.
- // Copy before sorting
- // Thread local is not available on XCode version < V.8 - It will slow down computation
-#ifdef GUDHI_CAN_USE_CXX11_THREAD_LOCAL
- thread_local
-#endif // GUDHI_CAN_USE_CXX11_THREAD_LOCAL
- std::vector<Vertex_handle> copy;
+ thread_local std::vector<Vertex_handle> copy;
copy.clear();
copy.insert(copy.end(), first, last);
std::sort(copy.begin(), copy.end());
@@ -827,7 +832,7 @@ class Simplex_tree {
/** Returns the Siblings containing a simplex.*/
template<class SimplexHandle>
- Siblings* self_siblings(SimplexHandle sh) {
+ static Siblings* self_siblings(SimplexHandle sh) {
if (sh->second.children()->parent() == sh->first)
return sh->second.children()->oncles();
else
@@ -1123,10 +1128,7 @@ class Simplex_tree {
Dictionary_it next = siblings->members().begin();
++next;
-#ifdef GUDHI_CAN_USE_CXX11_THREAD_LOCAL
- thread_local
-#endif // GUDHI_CAN_USE_CXX11_THREAD_LOCAL
- std::vector<std::pair<Vertex_handle, Node> > inter;
+ thread_local std::vector<std::pair<Vertex_handle, Node> > inter;
for (Dictionary_it s_h = siblings->members().begin();
s_h != siblings->members().end(); ++s_h, ++next) {
Simplex_handle root_sh = find_vertex(s_h->first);
@@ -1317,6 +1319,8 @@ class Simplex_tree {
* \post Some simplex tree functions require the filtration to be valid. `make_filtration_non_decreasing()`
* function is not launching `initialize_filtration()` but returns the filtration modification information. If the
* complex has changed , please call `initialize_filtration()` to recompute it.
+ *
+ * If a simplex has a `NaN` filtration value, it is considered lower than any other defined filtration value.
*/
bool make_filtration_non_decreasing() {
bool modified = false;
@@ -1347,7 +1351,9 @@ class Simplex_tree {
});
Filtration_value max_filt_border_value = filtration(*max_border);
- if (simplex.second.filtration() < max_filt_border_value) {
+ // Replacing if(f<max) with if(!(f>=max)) would mean that if f is NaN, we replace it with the max of the children.
+ // That seems more useful than keeping NaN.
+ if (!(simplex.second.filtration() >= max_filt_border_value)) {
// Store the filtration modification information
modified = true;
simplex.second.assign_filtration(max_filt_border_value);
@@ -1465,6 +1471,66 @@ class Simplex_tree {
}
}
+ /** \brief Returns a vertex of `sh` that has the same filtration value as `sh` if it exists, and `null_vertex()` otherwise.
+ *
+ * For a lower-star filtration built with `make_filtration_non_decreasing()`, this is a way to invert the process and find out which vertex had its filtration value propagated to `sh`.
+ * If several vertices have the same filtration value, the one it returns is arbitrary. */
+ Vertex_handle vertex_with_same_filtration(Simplex_handle sh) {
+ auto filt = filtration_(sh);
+ for(auto v : simplex_vertex_range(sh))
+ if(filtration_(find_vertex(v)) == filt)
+ return v;
+ return null_vertex();
+ }
+
+ /** \brief Returns an edge of `sh` that has the same filtration value as `sh` if it exists, and `null_simplex()` otherwise.
+ *
+ * For a flag-complex built with `expansion()`, this is a way to invert the process and find out which edge had its filtration value propagated to `sh`.
+ * If several edges have the same filtration value, the one it returns is arbitrary.
+ *
+ * \pre `sh` must have dimension at least 1. */
+ Simplex_handle edge_with_same_filtration(Simplex_handle sh) {
+ // See issue #251 for potential speed improvements.
+ auto&& vertices = simplex_vertex_range(sh); // vertices in decreasing order
+ auto end = std::end(vertices);
+ auto vi = std::begin(vertices);
+ GUDHI_CHECK(vi != end, "empty simplex");
+ auto v0 = *vi;
+ ++vi;
+ GUDHI_CHECK(vi != end, "simplex of dimension 0");
+ if(std::next(vi) == end) return sh; // shortcut for dimension 1
+ boost::container::static_vector<Vertex_handle, 40> suffix;
+ suffix.push_back(v0);
+ auto filt = filtration_(sh);
+ do
+ {
+ Vertex_handle v = *vi;
+ auto&& children1 = find_vertex(v)->second.children()->members_;
+ for(auto w : suffix){
+ // Can we take advantage of the fact that suffix is ordered?
+ Simplex_handle s = children1.find(w);
+ if(filtration_(s) == filt)
+ return s;
+ }
+ suffix.push_back(v);
+ }
+ while(++vi != end);
+ return null_simplex();
+ }
+
+ /** \brief Returns a minimal face of `sh` that has the same filtration value as `sh`.
+ *
+ * For a filtration built with `make_filtration_non_decreasing()`, this is a way to invert the process and find out which simplex had its filtration value propagated to `sh`.
+ * If several minimal (for inclusion) simplices have the same filtration value, the one it returns is arbitrary, and it is not guaranteed to be the one with smallest dimension. */
+ Simplex_handle minimal_simplex_with_same_filtration(Simplex_handle sh) {
+ auto filt = filtration_(sh);
+ // Naive implementation, it can be sped up.
+ for(auto b : boundary_simplex_range(sh))
+ if(filtration_(b) == filt)
+ return minimal_simplex_with_same_filtration(b);
+ return sh; // None of its faces has the same filtration.
+ }
+
private:
Vertex_handle null_vertex_;
/** \brief Total number of simplices in the complex, without the empty simplex.*/
diff --git a/src/Simplex_tree/include/gudhi/Simplex_tree/Simplex_tree_iterators.h b/src/Simplex_tree/include/gudhi/Simplex_tree/Simplex_tree_iterators.h
index efccf2f2..9007b6bd 100644
--- a/src/Simplex_tree/include/gudhi/Simplex_tree/Simplex_tree_iterators.h
+++ b/src/Simplex_tree/include/gudhi/Simplex_tree/Simplex_tree_iterators.h
@@ -15,9 +15,7 @@
#include <boost/iterator/iterator_facade.hpp>
#include <boost/version.hpp>
-#if BOOST_VERSION >= 105600
-# include <boost/container/static_vector.hpp>
-#endif
+#include <boost/container/static_vector.hpp>
#include <vector>
@@ -42,13 +40,13 @@ class Simplex_tree_simplex_vertex_iterator : public boost::iterator_facade<
typedef typename SimplexTree::Siblings Siblings;
typedef typename SimplexTree::Vertex_handle Vertex_handle;
- explicit Simplex_tree_simplex_vertex_iterator(SimplexTree * st)
+ explicit Simplex_tree_simplex_vertex_iterator(SimplexTree const* st)
: // any end() iterator
sib_(nullptr),
v_(st->null_vertex()) {
}
- Simplex_tree_simplex_vertex_iterator(SimplexTree * st, Simplex_handle sh)
+ Simplex_tree_simplex_vertex_iterator(SimplexTree const* st, Simplex_handle sh)
: sib_(st->self_siblings(sh)),
v_(sh->first) {
}
@@ -166,15 +164,11 @@ class Simplex_tree_boundary_simplex_iterator : public boost::iterator_facade<
// Most of the storage should be moved to the range, iterators should be light.
Vertex_handle last_; // last vertex of the simplex
Vertex_handle next_; // next vertex to push in suffix_
-#if BOOST_VERSION >= 105600
// 40 seems a conservative bound on the dimension of a Simplex_tree for now,
// as it would not fit on the biggest hard-drive.
boost::container::static_vector<Vertex_handle, 40> suffix_;
// static_vector still has some overhead compared to a trivial hand-made
// version using std::aligned_storage, or compared to making suffix_ static.
-#else
- std::vector<Vertex_handle> suffix_;
-#endif
Siblings * sib_; // where the next search will start from
Simplex_handle sh_; // current Simplex_handle in the boundary
SimplexTree * st_; // simplex containing the simplicial complex
diff --git a/src/Simplex_tree/test/CMakeLists.txt b/src/Simplex_tree/test/CMakeLists.txt
index 8b9163f5..cf2b0153 100644
--- a/src/Simplex_tree/test/CMakeLists.txt
+++ b/src/Simplex_tree/test/CMakeLists.txt
@@ -28,3 +28,9 @@ if (TBB_FOUND)
target_link_libraries(Simplex_tree_ctor_and_move_test_unit ${TBB_LIBRARIES})
endif()
gudhi_add_boost_test(Simplex_tree_ctor_and_move_test_unit)
+
+add_executable ( Simplex_tree_make_filtration_non_decreasing_test_unit simplex_tree_make_filtration_non_decreasing_unit_test.cpp )
+if (TBB_FOUND)
+ target_link_libraries(Simplex_tree_make_filtration_non_decreasing_test_unit ${TBB_LIBRARIES})
+endif()
+gudhi_add_boost_test(Simplex_tree_make_filtration_non_decreasing_test_unit)
diff --git a/src/Simplex_tree/test/simplex_tree_make_filtration_non_decreasing_unit_test.cpp b/src/Simplex_tree/test/simplex_tree_make_filtration_non_decreasing_unit_test.cpp
new file mode 100644
index 00000000..e0e7cadf
--- /dev/null
+++ b/src/Simplex_tree/test/simplex_tree_make_filtration_non_decreasing_unit_test.cpp
@@ -0,0 +1,148 @@
+/* This file is part of the Gudhi Library - https://gudhi.inria.fr/ - which is released under MIT.
+ * See file LICENSE or go to https://gudhi.inria.fr/licensing/ for full license details.
+ * Author(s): Vincent Rouvreau
+ *
+ * Copyright (C) 2020 Inria
+ *
+ * Modification(s):
+ * - YYYY/MM Author: Description of the modification
+ */
+
+#include <iostream>
+#include <limits> // for NaN
+#include <cmath> // for isNaN
+
+#define BOOST_TEST_DYN_LINK
+#define BOOST_TEST_MODULE "simplex_tree_make_filtration_non_decreasing"
+#include <boost/test/unit_test.hpp>
+#include <boost/mpl/list.hpp>
+
+// ^
+// /!\ Nothing else from Simplex_tree shall be included to test includes are well defined.
+#include "gudhi/Simplex_tree.h"
+
+using namespace Gudhi;
+
+typedef boost::mpl::list<Simplex_tree<>, Simplex_tree<Simplex_tree_options_fast_persistence>> list_of_tested_variants;
+
+BOOST_AUTO_TEST_CASE_TEMPLATE(make_filtration_non_decreasing, typeST, list_of_tested_variants) {
+ typeST st;
+
+ st.insert_simplex_and_subfaces({2, 1, 0}, 2.0);
+ st.insert_simplex_and_subfaces({3, 0}, 2.0);
+ st.insert_simplex_and_subfaces({3, 4, 5}, 2.0);
+
+ /* Inserted simplex: */
+ /* 1 */
+ /* o */
+ /* /X\ */
+ /* o---o---o---o */
+ /* 2 0 3\X/4 */
+ /* o */
+ /* 5 */
+
+ std::clog << "Check default insertion ensures the filtration values are non decreasing" << std::endl;
+ BOOST_CHECK(!st.make_filtration_non_decreasing());
+
+ // Because of non decreasing property of simplex tree, { 0 } , { 1 } and { 0, 1 } are going to be set from value 2.0
+ // to 1.0
+ st.insert_simplex_and_subfaces({0, 1, 6, 7}, 1.0);
+
+ // Inserted simplex:
+ // 1 6
+ // o---o
+ // /X\7/
+ // o---o---o---o
+ // 2 0 3\X/4
+ // o
+ // 5
+
+ std::clog << "Check default second insertion ensures the filtration values are non decreasing" << std::endl;
+ BOOST_CHECK(!st.make_filtration_non_decreasing());
+
+ // Copy original simplex tree
+ typeST st_copy = st;
+
+ // Modify specific values for st to become like st_copy thanks to make_filtration_non_decreasing
+ st.assign_filtration(st.find({0,1,6,7}), 0.8);
+ st.assign_filtration(st.find({0,1,6}), 0.9);
+ st.assign_filtration(st.find({0,6}), 0.6);
+ st.assign_filtration(st.find({3,4,5}), 1.2);
+ st.assign_filtration(st.find({3,4}), 1.1);
+ st.assign_filtration(st.find({4,5}), 1.99);
+
+ std::clog << "Check the simplex_tree is rolled back in case of decreasing filtration values" << std::endl;
+ BOOST_CHECK(st.make_filtration_non_decreasing());
+ BOOST_CHECK(st == st_copy);
+
+ // Other simplex tree
+ typeST st_other;
+ st_other.insert_simplex_and_subfaces({2, 1, 0}, 3.0); // This one is different from st
+ st_other.insert_simplex_and_subfaces({3, 0}, 2.0);
+ st_other.insert_simplex_and_subfaces({3, 4, 5}, 2.0);
+ st_other.insert_simplex_and_subfaces({0, 1, 6, 7}, 1.0);
+
+ // Modify specific values for st to become like st_other thanks to make_filtration_non_decreasing
+ st.assign_filtration(st.find({2}), 3.0);
+ // By modifying just the simplex {2}
+ // {0,1,2}, {1,2} and {0,2} will be modified
+
+ std::clog << "Check the simplex_tree is repaired in case of decreasing filtration values" << std::endl;
+ BOOST_CHECK(st.make_filtration_non_decreasing());
+ BOOST_CHECK(st == st_other);
+
+ // Modify specific values for st still to be non-decreasing
+ st.assign_filtration(st.find({0,1,2}), 10.0);
+ st.assign_filtration(st.find({0,2}), 9.0);
+ st.assign_filtration(st.find({0,1,6,7}), 50.0);
+ st.assign_filtration(st.find({0,1,6}), 49.0);
+ st.assign_filtration(st.find({0,1,7}), 48.0);
+ // Other copy simplex tree
+ typeST st_other_copy = st;
+
+ std::clog << "Check the simplex_tree is not modified in case of non-decreasing filtration values" << std::endl;
+ BOOST_CHECK(!st.make_filtration_non_decreasing());
+ BOOST_CHECK(st == st_other_copy);
+
+}
+
+BOOST_AUTO_TEST_CASE_TEMPLATE(make_filtration_non_decreasing_on_nan_values, typeST, list_of_tested_variants) {
+ typeST st;
+
+ st.insert_simplex_and_subfaces({2, 1, 0}, std::numeric_limits<double>::quiet_NaN());
+ st.insert_simplex_and_subfaces({3, 0}, std::numeric_limits<double>::quiet_NaN());
+ st.insert_simplex_and_subfaces({3, 4, 5}, std::numeric_limits<double>::quiet_NaN());
+
+ /* Inserted simplex: */
+ /* 1 */
+ /* o */
+ /* /X\ */
+ /* o---o---o---o */
+ /* 2 0 3\X/4 */
+ /* o */
+ /* 5 */
+
+ std::clog << "SPECIFIC CASE:" << std::endl;
+ std::clog << "Insertion with NaN values does not ensure the filtration values are non decreasing" << std::endl;
+ st.make_filtration_non_decreasing();
+
+ std::clog << "Check all filtration values are NaN" << std::endl;
+ for (auto f_simplex : st.complex_simplex_range()) {
+ BOOST_CHECK(std::isnan(st.filtration(f_simplex)));
+ }
+
+ st.assign_filtration(st.find({0}), 0.);
+ st.assign_filtration(st.find({1}), 0.);
+ st.assign_filtration(st.find({2}), 0.);
+ st.assign_filtration(st.find({3}), 0.);
+ st.assign_filtration(st.find({4}), 0.);
+ st.assign_filtration(st.find({5}), 0.);
+
+ std::clog << "Check make_filtration_non_decreasing is modifying the simplicial complex" << std::endl;
+ BOOST_CHECK(st.make_filtration_non_decreasing());
+
+ std::clog << "Check all filtration values are now defined" << std::endl;
+ for (auto f_simplex : st.complex_simplex_range()) {
+ BOOST_CHECK(!std::isnan(st.filtration(f_simplex)));
+ }
+}
diff --git a/src/Simplex_tree/test/simplex_tree_unit_test.cpp b/src/Simplex_tree/test/simplex_tree_unit_test.cpp
index 7746fa2a..9b5fa8fe 100644
--- a/src/Simplex_tree/test/simplex_tree_unit_test.cpp
+++ b/src/Simplex_tree/test/simplex_tree_unit_test.cpp
@@ -791,90 +791,6 @@ BOOST_AUTO_TEST_CASE(non_contiguous) {
BOOST_CHECK(++i == std::end(b));
}
-BOOST_AUTO_TEST_CASE(make_filtration_non_decreasing) {
- std::clog << "********************************************************************" << std::endl;
- std::clog << "MAKE FILTRATION NON DECREASING" << std::endl;
- typedef Simplex_tree<> typeST;
- typeST st;
-
- st.insert_simplex_and_subfaces({2, 1, 0}, 2.0);
- st.insert_simplex_and_subfaces({3, 0}, 2.0);
- st.insert_simplex_and_subfaces({3, 4, 5}, 2.0);
-
- /* Inserted simplex: */
- /* 1 */
- /* o */
- /* /X\ */
- /* o---o---o---o */
- /* 2 0 3\X/4 */
- /* o */
- /* 5 */
-
- std::clog << "Check default insertion ensures the filtration values are non decreasing" << std::endl;
- BOOST_CHECK(!st.make_filtration_non_decreasing());
-
- // Because of non decreasing property of simplex tree, { 0 } , { 1 } and { 0, 1 } are going to be set from value 2.0
- // to 1.0
- st.insert_simplex_and_subfaces({0, 1, 6, 7}, 1.0);
-
- // Inserted simplex:
- // 1 6
- // o---o
- // /X\7/
- // o---o---o---o
- // 2 0 3\X/4
- // o
- // 5
-
- std::clog << "Check default second insertion ensures the filtration values are non decreasing" << std::endl;
- BOOST_CHECK(!st.make_filtration_non_decreasing());
-
- // Copy original simplex tree
- typeST st_copy = st;
-
- // Modify specific values for st to become like st_copy thanks to make_filtration_non_decreasing
- st.assign_filtration(st.find({0,1,6,7}), 0.8);
- st.assign_filtration(st.find({0,1,6}), 0.9);
- st.assign_filtration(st.find({0,6}), 0.6);
- st.assign_filtration(st.find({3,4,5}), 1.2);
- st.assign_filtration(st.find({3,4}), 1.1);
- st.assign_filtration(st.find({4,5}), 1.99);
-
- std::clog << "Check the simplex_tree is rolled back in case of decreasing filtration values" << std::endl;
- BOOST_CHECK(st.make_filtration_non_decreasing());
- BOOST_CHECK(st == st_copy);
-
- // Other simplex tree
- typeST st_other;
- st_other.insert_simplex_and_subfaces({2, 1, 0}, 3.0); // This one is different from st
- st_other.insert_simplex_and_subfaces({3, 0}, 2.0);
- st_other.insert_simplex_and_subfaces({3, 4, 5}, 2.0);
- st_other.insert_simplex_and_subfaces({0, 1, 6, 7}, 1.0);
-
- // Modify specific values for st to become like st_other thanks to make_filtration_non_decreasing
- st.assign_filtration(st.find({2}), 3.0);
- // By modifying just the simplex {2}
- // {0,1,2}, {1,2} and {0,2} will be modified
-
- std::clog << "Check the simplex_tree is repaired in case of decreasing filtration values" << std::endl;
- BOOST_CHECK(st.make_filtration_non_decreasing());
- BOOST_CHECK(st == st_other);
-
- // Modify specific values for st still to be non-decreasing
- st.assign_filtration(st.find({0,1,2}), 10.0);
- st.assign_filtration(st.find({0,2}), 9.0);
- st.assign_filtration(st.find({0,1,6,7}), 50.0);
- st.assign_filtration(st.find({0,1,6}), 49.0);
- st.assign_filtration(st.find({0,1,7}), 48.0);
- // Other copy simplex tree
- typeST st_other_copy = st;
-
- std::clog << "Check the simplex_tree is not modified in case of non-decreasing filtration values" << std::endl;
- BOOST_CHECK(!st.make_filtration_non_decreasing());
- BOOST_CHECK(st == st_other_copy);
-
-}
-
typedef boost::mpl::list<boost::adjacency_list<boost::setS, boost::vecS, boost::directedS,
boost::property<vertex_filtration_t, double>,
@@ -986,5 +902,41 @@ BOOST_AUTO_TEST_CASE_TEMPLATE(insert_duplicated_vertices, typeST, list_of_tested
<< " - num_simplices = " << st.num_simplices() << std::endl;
BOOST_CHECK(st.dimension() == 1);
BOOST_CHECK(st.num_simplices() == st.num_vertices() + 1);
+}
+BOOST_AUTO_TEST_CASE_TEMPLATE(generators, typeST, list_of_tested_variants) {
+ std::cout << "********************************************************************" << std::endl;
+ std::cout << "TEST FIND GENERATORS" << std::endl;
+ {
+ typeST st;
+ st.insert_simplex_and_subfaces({0,1,2,3,4,5,6},0);
+ st.assign_filtration(st.find({0,2,4}), 10);
+ st.assign_filtration(st.find({1,5}), 20);
+ st.assign_filtration(st.find({1,2,4}), 30);
+ st.assign_filtration(st.find({3}), 5);
+ st.make_filtration_non_decreasing();
+ BOOST_CHECK(st.filtration(st.find({1,2}))==0);
+ BOOST_CHECK(st.filtration(st.find({0,1,2,3,4}))==30);
+ BOOST_CHECK(st.minimal_simplex_with_same_filtration(st.find({0,1,2,3,4,5}))==st.find({1,2,4}));
+ BOOST_CHECK(st.minimal_simplex_with_same_filtration(st.find({0,2,3}))==st.find({3}));
+ auto s=st.minimal_simplex_with_same_filtration(st.find({0,2,6}));
+ BOOST_CHECK(s==st.find({0})||s==st.find({2})||s==st.find({6}));
+ BOOST_CHECK(st.vertex_with_same_filtration(st.find({2}))==2);
+ BOOST_CHECK(st.vertex_with_same_filtration(st.find({1,5}))==st.null_vertex());
+ BOOST_CHECK(st.vertex_with_same_filtration(st.find({5,6}))>=5);
+ }
+ {
+ typeST st;
+ st.insert_simplex_and_subfaces({0,1}, 8);
+ st.insert_simplex_and_subfaces({0,2}, 10);
+ st.insert_simplex_and_subfaces({3,4}, 6);
+ st.insert_simplex_and_subfaces({1,2}, 5);
+ st.insert_simplex_and_subfaces({1,5}, 4);
+ st.insert_simplex_and_subfaces({0,5}, 3);
+ st.insert_simplex_and_subfaces({2,5}, 2);
+ st.insert_simplex_and_subfaces({1,3}, 9);
+ st.expansion(50);
+ BOOST_CHECK(st.edge_with_same_filtration(st.find({0,1,2,5}))==st.find({0,2}));
+ BOOST_CHECK(st.edge_with_same_filtration(st.find({1,5}))==st.find({1,5}));
+ }
}