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| author | Marc Glisse <marc.glisse@inria.fr> | 2022-03-30 22:11:00 +0200 |
|---|---|---|
| committer | Marc Glisse <marc.glisse@inria.fr> | 2022-03-30 22:11:00 +0200 |
| commit | 90a3a5067eb250e61105c1660ffe0c004d44fd39 (patch) | |
| tree | a641d7fac1c275af52b2eb3c889d68ddac89eb15 /src/python/gudhi/simplex_tree.pxd | |
| parent | 2830010c74cc74d29691faeeb7bb3a31cc53d87d (diff) | |
| parent | bbff86f1218fc7bc9976353901aa94cfa54792f6 (diff) | |
Merge remote-tracking branch 'origin/master' into insert
Diffstat (limited to 'src/python/gudhi/simplex_tree.pxd')
| -rw-r--r-- | src/python/gudhi/simplex_tree.pxd | 15 |
1 files changed, 13 insertions, 2 deletions
diff --git a/src/python/gudhi/simplex_tree.pxd b/src/python/gudhi/simplex_tree.pxd index 3bd9b080..175f970e 100644 --- a/src/python/gudhi/simplex_tree.pxd +++ b/src/python/gudhi/simplex_tree.pxd @@ -36,9 +36,16 @@ cdef extern from "Simplex_tree_interface.h" namespace "Gudhi": Simplex_tree_skeleton_iterator operator++() nogil bint operator!=(Simplex_tree_skeleton_iterator) nogil + cdef cppclass Simplex_tree_boundary_iterator "Gudhi::Simplex_tree_interface<Gudhi::Simplex_tree_options_full_featured>::Boundary_simplex_iterator": + Simplex_tree_boundary_iterator() nogil + Simplex_tree_simplex_handle& operator*() nogil + Simplex_tree_boundary_iterator operator++() nogil + bint operator!=(Simplex_tree_boundary_iterator) nogil + cdef cppclass Simplex_tree_interface_full_featured "Gudhi::Simplex_tree_interface<Gudhi::Simplex_tree_options_full_featured>": - Simplex_tree() nogil + Simplex_tree_interface_full_featured() nogil + Simplex_tree_interface_full_featured(Simplex_tree_interface_full_featured&) nogil double simplex_filtration(vector[int] simplex) nogil void assign_simplex_filtration(vector[int] simplex, double filtration) nogil void initialize_filtration() nogil @@ -58,6 +65,9 @@ cdef extern from "Simplex_tree_interface.h" namespace "Gudhi": bool make_filtration_non_decreasing() nogil void compute_extended_filtration() nogil vector[vector[pair[int, pair[double, double]]]] compute_extended_persistence_subdiagrams(vector[pair[int, pair[double, double]]] dgm, double min_persistence) nogil + Simplex_tree_interface_full_featured* collapse_edges(int nb_collapse_iteration) nogil except + + void reset_filtration(double filtration, int dimension) nogil + bint operator==(Simplex_tree_interface_full_featured) nogil # Iterators over Simplex tree pair[vector[int], double] get_simplex_and_filtration(Simplex_tree_simplex_handle f_simplex) nogil Simplex_tree_simplices_iterator get_simplices_iterator_begin() nogil @@ -66,11 +76,12 @@ cdef extern from "Simplex_tree_interface.h" namespace "Gudhi": vector[Simplex_tree_simplex_handle].const_iterator get_filtration_iterator_end() nogil Simplex_tree_skeleton_iterator get_skeleton_iterator_begin(int dimension) nogil Simplex_tree_skeleton_iterator get_skeleton_iterator_end(int dimension) nogil + pair[Simplex_tree_boundary_iterator, Simplex_tree_boundary_iterator] get_boundary_iterators(vector[int] simplex) nogil except + cdef extern from "Persistent_cohomology_interface.h" namespace "Gudhi": cdef cppclass Simplex_tree_persistence_interface "Gudhi::Persistent_cohomology_interface<Gudhi::Simplex_tree<Gudhi::Simplex_tree_options_full_featured>>": Simplex_tree_persistence_interface(Simplex_tree_interface_full_featured * st, bool persistence_dim_max) nogil - void compute_persistence(int homology_coeff_field, double min_persistence) nogil + void compute_persistence(int homology_coeff_field, double min_persistence) nogil except + vector[pair[int, pair[double, double]]] get_persistence() nogil vector[int] betti_numbers() nogil vector[int] persistent_betti_numbers(double from_value, double to_value) nogil |