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authorROUVREAU Vincent <vincent.rouvreau@inria.fr>2020-05-24 10:16:58 +0200
committerROUVREAU Vincent <vincent.rouvreau@inria.fr>2020-05-24 10:16:58 +0200
commit78fb7ccd413ca655bdbe4adc9b4b256f20e11fe5 (patch)
treed7b9ec2ade4053901f5284326aff3aaaff8c312a /src/python/include/Alpha_complex_interface.h
parent50b460f867b5801ce3459d60fb86b02051eb4a7d (diff)
c++ version to trigger exact/inexact kernel
Diffstat (limited to 'src/python/include/Alpha_complex_interface.h')
-rw-r--r--src/python/include/Alpha_complex_interface.h73
1 files changed, 54 insertions, 19 deletions
diff --git a/src/python/include/Alpha_complex_interface.h b/src/python/include/Alpha_complex_interface.h
index 3dd01345..46f2ba03 100644
--- a/src/python/include/Alpha_complex_interface.h
+++ b/src/python/include/Alpha_complex_interface.h
@@ -29,40 +29,75 @@ namespace Gudhi {
namespace alpha_complex {
-using Exact_kernel = CGAL::Epeck_d< CGAL::Dynamic_dimension_tag >;
-using Inexact_kernel = CGAL::Epick_d< CGAL::Dynamic_dimension_tag >;
-
-template <class Kernel>
class Alpha_complex_interface {
- using Point_d = typename Kernel::Point_d;
+ private:
+ using Exact_kernel = CGAL::Epeck_d< CGAL::Dynamic_dimension_tag >;
+ using Inexact_kernel = CGAL::Epick_d< CGAL::Dynamic_dimension_tag >;
+ using Point_exact_kernel = typename Exact_kernel::Point_d;
+ using Point_inexact_kernel = typename Inexact_kernel::Point_d;
+
+ template <typename CgalPointType>
+ std::vector<double> pt_cgal_to_cython(CgalPointType& ph) {
+ std::vector<double> vd;
+ for (auto coord = ph.cartesian_begin(); coord != ph.cartesian_end(); coord++)
+ vd.push_back(CGAL::to_double(*coord));
+ return vd;
+ }
+
+ template <typename CgalPointType>
+ CgalPointType pt_cython_to_cgal(std::vector<double> const& vec) {
+ return CgalPointType(vec.size(), vec.begin(), vec.end());
+ }
public:
- Alpha_complex_interface(const std::vector<std::vector<double>>& points) {
- auto mkpt = [](std::vector<double> const& vec){
- return Point_d(vec.size(), vec.begin(), vec.end());
- };
- alpha_complex_ = std::make_unique<Alpha_complex<Kernel>>(boost::adaptors::transform(points, mkpt));
+ Alpha_complex_interface(const std::vector<std::vector<double>>& points, bool fast_version)
+ : fast_version_(fast_version) {
+ auto pt = pt_cython_to_cgal<Point_inexact_kernel>(points[0]);
+ if (fast_version_) {
+ auto mkpt = [](std::vector<double> const& vec) {
+ return Point_inexact_kernel(vec.size(), vec.begin(), vec.end());
+ };
+ ac_inexact_ptr_ = std::make_unique<Alpha_complex<Inexact_kernel>>(boost::adaptors::transform(points, mkpt));
+ //ac_inexact_ptr_ = std::make_unique<Alpha_complex<Inexact_kernel>>(boost::adaptors::transform(points, pt_cython_to_cgal<Point_inexact_kernel>));
+ } else {
+ auto mkpt = [](std::vector<double> const& vec) {
+ return Point_exact_kernel(vec.size(), vec.begin(), vec.end());
+ };
+ ac_exact_ptr_ = std::make_unique<Alpha_complex<Exact_kernel>>(boost::adaptors::transform(points, mkpt));
+ //ac_exact_ptr_ = std::make_unique<Alpha_complex<Exact_kernel>>(boost::adaptors::transform(points, pt_cython_to_cgal<Point_exact_kernel>));
+ }
}
- Alpha_complex_interface(const std::string& off_file_name, bool from_file = true) {
- alpha_complex_ = std::make_unique<Alpha_complex<Kernel>>(off_file_name);
+ Alpha_complex_interface(const std::string& off_file_name, bool fast_version, bool from_file = true)
+ : fast_version_(fast_version) {
+ if (fast_version_)
+ ac_inexact_ptr_ = std::make_unique<Alpha_complex<Inexact_kernel>>(off_file_name);
+ else
+ ac_exact_ptr_ = std::make_unique<Alpha_complex<Exact_kernel>>(off_file_name);
}
std::vector<double> get_point(int vh) {
- std::vector<double> vd;
- Point_d const& ph = alpha_complex_->get_point(vh);
- for (auto coord = ph.cartesian_begin(); coord != ph.cartesian_end(); coord++)
- vd.push_back(CGAL::to_double(*coord));
- return vd;
+ if (fast_version_) {
+ Point_inexact_kernel const& ph = ac_inexact_ptr_->get_point(vh);
+ return pt_cgal_to_cython(ph);
+ } else {
+ Point_exact_kernel const& ph = ac_exact_ptr_->get_point(vh);
+ return pt_cgal_to_cython(ph);
+ }
}
void create_simplex_tree(Simplex_tree_interface<>* simplex_tree, double max_alpha_square,
bool exact_version, bool default_filtration_value) {
- alpha_complex_->create_complex(*simplex_tree, max_alpha_square, exact_version, default_filtration_value);
+ if (fast_version_)
+ ac_inexact_ptr_->create_complex(*simplex_tree, max_alpha_square, exact_version, default_filtration_value);
+ else
+ ac_exact_ptr_->create_complex(*simplex_tree, max_alpha_square, exact_version, default_filtration_value);
}
private:
- std::unique_ptr<Alpha_complex<Kernel>> alpha_complex_;
+ bool fast_version_;
+ std::unique_ptr<Alpha_complex<Exact_kernel>> ac_exact_ptr_;
+ std::unique_ptr<Alpha_complex<Inexact_kernel>> ac_inexact_ptr_;
};
} // namespace alpha_complex