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authorvrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb>2017-01-16 09:43:21 +0000
committervrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb>2017-01-16 09:43:21 +0000
commitb987fc9acca83d8a0dca40647cfe804edfcee2a7 (patch)
tree6c150be3444ab047bd7eb1fe9cb3f5149dae2147 /src
parentdf601fe3e27210133e3551352382be779a4408ca (diff)
Remove the usage functions and modified the doc for oneskeletonripspoints and oneskeletonripsdistance. No added value as distance matrix and points set is hard defined.
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1939 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 13142245f95995a13c5bf484a6f8bf5d4bf53b58
Diffstat (limited to 'src')
-rw-r--r--src/Rips_complex/doc/Intro_rips_complex.h6
-rw-r--r--src/Rips_complex/example/CMakeLists.txt5
-rw-r--r--src/Rips_complex/example/example_one_skeleton_rips_from_distance_matrix.cpp14
-rw-r--r--src/Rips_complex/example/example_one_skeleton_rips_from_points.cpp14
4 files changed, 9 insertions, 30 deletions
diff --git a/src/Rips_complex/doc/Intro_rips_complex.h b/src/Rips_complex/doc/Intro_rips_complex.h
index 8bacd0e7..64fd34bc 100644
--- a/src/Rips_complex/doc/Intro_rips_complex.h
+++ b/src/Rips_complex/doc/Intro_rips_complex.h
@@ -69,9 +69,9 @@ namespace rips_complex {
* \include Rips_complex/example_one_skeleton_rips_from_points.cpp
*
* When launching (rips maximal distance between 2 points is 12.0, is expanded until dimension 1 - one skeleton graph
- * with other words):
+ * in other words):
*
- * \code $> ./oneskeletonripspoints 12.0
+ * \code $> ./oneskeletonripspoints
* \endcode
*
* the program output is:
@@ -114,7 +114,7 @@ namespace rips_complex {
* When launching (rips maximal distance between 2 points is 1.0, is expanded until dimension 1 - one skeleton graph
* with other words):
*
- * \code $> ./oneskeletonripsdistance 1.0
+ * \code $> ./oneskeletonripsdistance
* \endcode
*
* the program output is:
diff --git a/src/Rips_complex/example/CMakeLists.txt b/src/Rips_complex/example/CMakeLists.txt
index c15a13d0..070ac710 100644
--- a/src/Rips_complex/example/CMakeLists.txt
+++ b/src/Rips_complex/example/CMakeLists.txt
@@ -22,9 +22,8 @@ if (TBB_FOUND)
target_link_libraries(ripscsvdistancereader ${TBB_LIBRARIES})
endif()
-add_test(oneskeletonripspoints ${CMAKE_CURRENT_BINARY_DIR}/oneskeletonripspoints 12.0)
-
-add_test(oneskeletonripsdistance ${CMAKE_CURRENT_BINARY_DIR}/oneskeletonripspoints 1.0)
+add_test(oneskeletonripspoints ${CMAKE_CURRENT_BINARY_DIR}/oneskeletonripspoints)
+add_test(oneskeletonripsdistance ${CMAKE_CURRENT_BINARY_DIR}/oneskeletonripsdistance)
# Do not forget to copy test files in current binary dir
file(COPY "${CMAKE_SOURCE_DIR}/data/points/alphacomplexdoc.off" DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/)
diff --git a/src/Rips_complex/example/example_one_skeleton_rips_from_distance_matrix.cpp b/src/Rips_complex/example/example_one_skeleton_rips_from_distance_matrix.cpp
index 326ad52f..765d65ea 100644
--- a/src/Rips_complex/example/example_one_skeleton_rips_from_distance_matrix.cpp
+++ b/src/Rips_complex/example/example_one_skeleton_rips_from_distance_matrix.cpp
@@ -7,18 +7,7 @@
#include <vector>
#include <limits> // for std::numeric_limits
-void usage(int nbArgs, char * const progName) {
- std::cerr << "Error: Number of arguments (" << nbArgs << ") is not correct\n";
- std::cerr << "Usage: " << progName << " threshold\n";
- std::cerr << " i.e.: " << progName << " 12.0\n";
- exit(-1); // ----- >>
-}
-
-int main(int argc, char **argv) {
- if (argc != 2) usage(argc, argv[0]);
-
- double threshold = atof(argv[1]);
-
+int main() {
// Type definitions
using Simplex_tree = Gudhi::Simplex_tree<Gudhi::Simplex_tree_options_fast_persistence>;
using Filtration_value = Simplex_tree::Filtration_value;
@@ -42,6 +31,7 @@ int main(int argc, char **argv) {
// ----------------------------------------------------------------------------
// Init of a rips complex from points
// ----------------------------------------------------------------------------
+ double threshold = 1.0;
Rips_complex rips_complex_from_points(distances, threshold);
Simplex_tree stree;
diff --git a/src/Rips_complex/example/example_one_skeleton_rips_from_points.cpp b/src/Rips_complex/example/example_one_skeleton_rips_from_points.cpp
index 6e8dee27..5d1216a0 100644
--- a/src/Rips_complex/example/example_one_skeleton_rips_from_points.cpp
+++ b/src/Rips_complex/example/example_one_skeleton_rips_from_points.cpp
@@ -7,18 +7,7 @@
#include <vector>
#include <limits> // for std::numeric_limits
-void usage(int nbArgs, char * const progName) {
- std::cerr << "Error: Number of arguments (" << nbArgs << ") is not correct\n";
- std::cerr << "Usage: " << progName << " threshold\n";
- std::cerr << " i.e.: " << progName << " 12.0\n";
- exit(-1); // ----- >>
-}
-
-int main(int argc, char **argv) {
- if (argc != 2) usage(argc, argv[0]);
-
- double threshold = atof(argv[1]);
-
+int main() {
// Type definitions
using Point = std::vector<double>;
using Simplex_tree = Gudhi::Simplex_tree<Gudhi::Simplex_tree_options_fast_persistence>;
@@ -37,6 +26,7 @@ int main(int argc, char **argv) {
// ----------------------------------------------------------------------------
// Init of a rips complex from points
// ----------------------------------------------------------------------------
+ double threshold = 12.0;
Rips_complex rips_complex_from_points(points, threshold, Euclidean_distance());
Simplex_tree stree;