diff options
Diffstat (limited to '.github')
| -rw-r--r-- | .github/for_maintainers/new_gudhi_version_creation.md | 10 | ||||
| -rw-r--r-- | .github/next_release.md | 50 |
2 files changed, 15 insertions, 45 deletions
diff --git a/.github/for_maintainers/new_gudhi_version_creation.md b/.github/for_maintainers/new_gudhi_version_creation.md index 8674222b..86c393a0 100644 --- a/.github/for_maintainers/new_gudhi_version_creation.md +++ b/.github/for_maintainers/new_gudhi_version_creation.md @@ -17,8 +17,7 @@ rm -rf data/points/COIL_database/lucky_cat.off_dist data/points/COIL_database/lu Checkin the modifications, build and test the version: ```bash git submodule update --init -mkdir build -cd build +rm -rf build; mkdir build; cd build cmake -DCGAL_DIR=/your/path/to/CGAL -DWITH_GUDHI_EXAMPLE=ON -DWITH_GUDHI_BENCHMARK=ON -DUSER_VERSION_DIR=gudhi.@GUDHI_VERSION@ -DPython_ADDITIONAL_VERSIONS=3 .. make user_version date +"%d-%m-%Y-%T" > gudhi.@GUDHI_VERSION@/timestamp.txt @@ -27,7 +26,7 @@ md5sum gudhi.@GUDHI_VERSION@.tar.gz > md5sum.txt sha256sum gudhi.@GUDHI_VERSION@.tar.gz > sha256sum.txt sha512sum gudhi.@GUDHI_VERSION@.tar.gz > sha512sum.txt -make -j all test +make -j 4 all && ctest -j 4 --output-on-failure ``` ***[Check there are no error]*** @@ -43,7 +42,8 @@ make doxygen 2>&1 | tee dox.log && grep warning dox.log ```bash cp -R gudhi.@GUDHI_VERSION@/doc/html gudhi.doc.@GUDHI_VERSION@/cpp cd gudhi.@GUDHI_VERSION@ -rm -rf build; mkdir build; cd build; cmake -DCGAL_DIR=/your/path/to/CGAL -DWITH_GUDHI_EXAMPLE=ON -DPython_ADDITIONAL_VERSIONS=3 .. +rm -rf build; mkdir build; cd build +cmake -DCGAL_DIR=/your/path/to/CGAL -DWITH_GUDHI_EXAMPLE=ON -DPython_ADDITIONAL_VERSIONS=3 .. export LC_ALL=en_US.UTF-8 # cf. bug make sphinx ``` @@ -56,7 +56,7 @@ cd ../.. tar -czvf gudhi.doc.@GUDHI_VERSION@.tar.gz gudhi.doc.@GUDHI_VERSION@ cd gudhi.@GUDHI_VERSION@/build -make all test +make -j 4 all && ctest -j 4 --output-on-failure ``` ***[Check there are no error]*** diff --git a/.github/next_release.md b/.github/next_release.md index d3c9ce68..a2805a55 100644 --- a/.github/next_release.md +++ b/.github/next_release.md @@ -1,50 +1,19 @@ -We are pleased to announce the release 3.2.0 of the GUDHI library. +We are pleased to announce the release 3.X.X of the GUDHI library. -As a major new feature, the GUDHI library now offers a Python interface to [Hera](https://bitbucket.org/grey_narn/hera/src/master/) to compute the Wasserstein distance. -[PyBind11](https://github.com/pybind/pybind11) is now required to build the Python module. +As a major new feature, the GUDHI library now offers ... -We are now using GitHub to develop the GUDHI library, do not hesitate to [fork the GUDHI project on GitHub](https://github.com/GUDHI/gudhi-devel). From a user point of view, we recommend to download GUDHI user version (gudhi.3.2.0.tar.gz). +We are now using GitHub to develop the GUDHI library, do not hesitate to [fork the GUDHI project on GitHub](https://github.com/GUDHI/gudhi-devel). From a user point of view, we recommend to download GUDHI user version (gudhi.3.X.X.tar.gz). -Below is a list of changes made since GUDHI 3.1.1: +Below is a list of changes made since GUDHI 3.X-1.X-1: -- Point cloud utilities - - A new module [Time Delay Embedding](https://gudhi.inria.fr/python/latest/point_cloud.html#time-delay-embedding) - to embed time-series data in the R^d according to [Takens' Embedding Theorem](https://en.wikipedia.org/wiki/Takens%27s_theorem) - and obtain the coordinates of each point. - - A new module [K Nearest Neighbors](https://gudhi.inria.fr/python/latest/point_cloud.html#k-nearest-neighbors) - that wraps several implementations for computing the k nearest neighbors in a point set. - - A new module [Distance To Measure](https://gudhi.inria.fr/python/latest/point_cloud.html#distance-to-measure) - to compute the distance to the empirical measure defined by a point set +- [Module](link) + - ... -- [Persistence representations](https://gudhi.inria.fr/python/latest/representations.html) - - Interface to Wasserstein distances. - -- Rips complex - - A new module [Weighted Rips Complex](https://gudhi.inria.fr/python/latest/rips_complex_user.html#weighted-rips-complex) - to construct a simplicial complex from a distance matrix and weights on vertices. - -- [Wassertein distance](https://gudhi.inria.fr/python/latest/wasserstein_distance_user.html) - - An [another implementation](https://gudhi.inria.fr/python/latest/wasserstein_distance_user.html#hera) - comes from Hera (BSD-3-Clause) which is based on [Geometry Helps to Compare Persistence Diagrams](http://doi.acm.org/10.1145/3064175) - by Michael Kerber, Dmitriy Morozov, and Arnur Nigmetov. - - `gudhi.wasserstein.wasserstein_distance` has now an option to return the optimal matching that achieves the distance between the two diagrams. - - A new module [Barycenters](https://gudhi.inria.fr/python/latest/wasserstein_distance_user.html#barycenters) - to estimate the Frechet mean (aka Wasserstein barycenter) between persistence diagrams. - -- [Simplex tree](https://gudhi.inria.fr/python/latest/simplex_tree_ref.html) - - Extend filtration method to compute extended persistence - - Flag and lower star persistence pairs generators - - A new interface to filtration, simplices and skeleton getters to return an iterator - -- [Alpha complex](https://gudhi.inria.fr/doc/latest/group__alpha__complex.html) - - Improve computations (cache circumcenters computation and point comparison improvement) - -- [Persistence graphical tools](https://gudhi.inria.fr/python/latest/persistence_graphical_tools_user.html) - - New rendering option proposed (use LaTeX style, add grey block, improved positioning of labels, etc.). - - Can now handle (N x 2) numpy arrays as input +- [Module](link) + - ... - Miscellaneous - - The [list of bugs that were solved since GUDHI-3.2.0](https://github.com/GUDHI/gudhi-devel/issues?q=label%3A3.2.0+is%3Aclosed) is available on GitHub. + - The [list of bugs that were solved since GUDHI-3.X-1.X-1](https://github.com/GUDHI/gudhi-devel/issues?q=label%3A3.1.1+is%3Aclosed) is available on GitHub. All modules are distributed under the terms of the MIT license. However, there are still GPL dependencies for many modules. We invite you to check our [license dedicated web page](https://gudhi.inria.fr/licensing/) for further details. @@ -56,3 +25,4 @@ We provide [bibtex entries](https://gudhi.inria.fr/doc/latest/_citation.html) fo Feel free to [contact us](https://gudhi.inria.fr/contact/) in case you have any questions or remarks. For further information about downloading and installing the library ([C++](https://gudhi.inria.fr/doc/latest/installation.html) or [Python](https://gudhi.inria.fr/python/latest/installation.html)), please visit the [GUDHI web site](https://gudhi.inria.fr/). + |