21 files changed, 430 insertions, 0 deletions
diff --git a/debian/changelog b/debian/changelog
new file mode 100644
index 00000000..1d43f2b6
--- /dev/null
+++ b/debian/changelog
@@ -0,0 +1,5 @@
+gudhi (2.0.1+dfsg-1) unstable; urgency=medium
+
+  * Initial packaging. (Closes: #840686)
+
+ -- Gard Spreemann <gspreemann@gmail.com>  Mon, 09 Oct 2017 10:50:00 +0200
diff --git a/debian/compat b/debian/compat
new file mode 100644
index 00000000..f599e28b
--- /dev/null
+++ b/debian/compat
@@ -0,0 +1 @@
+10
diff --git a/debian/control b/debian/control
new file mode 100644
index 00000000..8a554ecd
--- /dev/null
+++ b/debian/control
@@ -0,0 +1,110 @@
+Source: gudhi
+Maintainer: Gard Spreemann <gspreemann@gmail.com>
+Section: math
+Priority: optional
+Standards-Version: 4.0.0
+Build-Depends: cmake (>= 2.6), cython3, debhelper (>= 10), dh-python, doxygen,
+ graphviz, libboost-chrono-dev (>= 1.48), libboost-filesystem-dev (>= 1.48),
+ libboost-program-options-dev (>= 1.48), libboost-system-dev (>= 1.48),
+ libboost-test-dev (>= 1.48), libboost-timer-dev (>= 1.48),
+ libcgal-dev (>= 4.8.1), libcgal-qt5-dev (>= 4.8.1), libeigen3-dev (>= 3.1.0),
+ libgmp-dev (>= 4.2), libqglviewer-dev-qt5, libtbb-dev, python3-dev,
+ python3-matplotlib, python3-tk, qtbase5-dev
+Homepage: http://gudhi.gforge.inria.fr/
+Vcs-Browser: https://git.nonempty.org/debian-gudhi
+Vcs-Git: https://git.nonempty.org/debian-gudhi -b debian/sid
+Testsuite: autopkgtest
+
+Package: libgudhi-dev
+Section: libdevel
+Architecture: all
+Multi-Arch: foreign
+Depends: ${misc:Depends}, libboost-chrono-dev (>= 1.48),
+ libboost-filesystem-dev (>= 1.48), libboost-program-options-dev (>= 1.48),
+ libboost-system-dev (>= 1.48), libboost-test-dev (>= 1.48),
+ libboost-timer-dev (>= 1.48), libcgal-dev (>= 4.8.1),
+ libeigen3-dev (>= 3.1.0), libgmp-dev (>= 4.2), libtbb-dev
+Suggests: libgudhi-doc, libgudhi-examples
+Description: Generic open source C++ library for topological data analysis
+ The GUDHI library is a generic open source C++ library for
+ Topological Data Analysis (TDA) and Higher Dimensional Geometry
+ Understanding. The library offers state-of-the-art data structures
+ and algorithms to construct simplicial complexes and compute
+ persistent homology.
+ .
+ The GUDHI library is developed as part of the GUDHI project supported
+ by the European Research Council.
+ .
+ This package contains the header files. See the libgudhi-examples
+ package for example programs using the library.
+
+Package: libgudhi-examples
+Section: libs
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends}
+Recommends: libgudhi-dev, libgudhi-doc
+Description: Example programs for the GUDHI library for topological data analysis
+ The GUDHI library is a generic open source C++ library for
+ Topological Data Analysis (TDA) and Higher Dimensional Geometry
+ Understanding. The library offers state-of-the-art data structures
+ and algorithms to construct simplicial complexes and compute
+ persistent homology.
+ .
+ The GUDHI library is developed as part of the GUDHI project supported
+ by the European Research Council.
+ .
+ This package contains some upstream example programs and their source
+ code.
+
+Package: libgudhi-doc
+Section: doc
+Architecture: all
+Multi-Arch: foreign
+Depends: ${misc:Depends}, libjs-mathjax
+Description: Documentation for the GUDHI library for topological data analysis
+ The GUDHI library is a generic open source C++ library for
+ Topological Data Analysis (TDA) and Higher Dimensional Geometry
+ Understanding. The library offers state-of-the-art data structures
+ and algorithms to construct simplicial complexes and compute
+ persistent homology.
+ .
+ The GUDHI library is developed as part of the GUDHI project supported
+ by the European Research Council.
+ .
+ This package contains documentation for the package.
+
+Package: python3-gudhi
+Section: python
+Architecture: any
+Multi-Arch: same
+Depends: ${shlibs:Depends}, ${misc:Depends}, ${python3:Depends}
+Recommends: python3-matplotlib
+Description: Python 3 interface to the GUDHI library for topological data analysis
+ The GUDHI library is a generic open source C++ library for
+ Topological Data Analysis (TDA) and Higher Dimensional Geometry
+ Understanding. The library offers state-of-the-art data structures
+ and algorithms to construct simplicial complexes and compute
+ persistent homology.
+ .
+ The GUDHI library is developed as part of the GUDHI project supported
+ by the European Research Council.
+ .
+ This package contains GUDHI's Python (3) interface.
+
+Package: gudhui
+Section: math
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends}
+Description: GUI for some of the functionality of the GUDHI library
+ The GUDHI library is a generic open source C++ library for
+ Topological Data Analysis (TDA) and Higher Dimensional Geometry
+ Understanding. The library offers state-of-the-art data structures
+ and algorithms to construct simplicial complexes and compute
+ persistent homology.
+ .
+ The GUDHI library is developed as part of the GUDHI project supported
+ by the European Research Council.
+ .
+ This package contains GudhUI, a graphical interface to a few of GUDHI's
+ features. Be aware that it is quite rough around the edges.
+ 
+\ No newline at end of file
diff --git a/debian/copyright b/debian/copyright
new file mode 100644
index 00000000..25754d81
--- /dev/null
+++ b/debian/copyright
@@ -0,0 +1,86 @@
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: gudhi
+Files-Excluded: GudhUI/utils/homsimpl data/filtered_simplicial_complex/bunny_5000_complex.fsc data/points/COIL_database data/points/SO3* data/points/bunny*
+Source: http://gudhi.gforge.inria.fr
+ Deleted unnecessary precompiled binary and upstream data files of unclear licensing status.
+
+Files: *
+Copyright: 2014-2017 Inria Sophia Antipolis - Méditerranée
+           2014-2017 Inria Saclay - Île-de-France
+           2014-2017 Université Nice Sophia Antipolis
+License: GPL-3.0+
+
+Files: cmake/modules/FindEigen3.cmake
+Copyright: 2006, 2007 Montel Laurent <montel@kde.org>
+           2008, 2009 Gael Guennebaud <g.gael@free.fr>
+           2009 Benoit Jacob <jacob.benoit.1@gmail.com>
+License: BSD-2-clause
+
+Files: cmake/modules/FindTBB.cmake
+Copyright: Hannes Hofmann
+License: MIT
+ Permission is hereby granted, free of charge, to any person obtaining
+ a copy of this software and associated documentation files (the
+ "Software"), to deal in the Software without restriction, including
+ without limitation the rights to use, copy, modify, merge, publish,
+ distribute, sublicense, and/or sell copies of the Software, and to
+ permit persons to whom the Software is furnished to do so, subject to
+ the following conditions:
+ .
+ The above copyright notice and this permission notice shall be
+ included in all copies or substantial portions of the Software.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+ MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+ NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS
+ BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN
+ ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
+ CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+ SOFTWARE.
+
+Files: debian/*
+Copyright: 2016 Gard Spreemann <gspreemann@gmail.com>
+License: GPL-3.0+
+
+License: GPL-3.0+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+ .
+ This package is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this program. If not, see <https://www.gnu.org/licenses/>.
+ .
+ On Debian systems, the complete text of the GNU General
+ Public License version 3 can be found in "/usr/share/common-licenses/GPL-3".
+
+License: BSD-2-clause
+ Redistribution and use in source and binary forms, with or without
+ modification, are permitted provided that the following conditions
+ are met:
+ .
+ 1. Redistributions of source code must retain the above copyright
+ notice, this list of conditions and the following disclaimer.
+ .
+ 2. Redistributions in binary form must reproduce the above copyright
+ notice, this list of conditions and the following disclaimer in the
+ documentation and/or other materials provided with the distribution.
+ .
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
+ "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
+ LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
+ A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
+ HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT,
+ INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING,
+ BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS
+ OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED
+ AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
+ LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY
+ WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
+ POSSIBILITY OF SUCH DAMAGE.
+\ No newline at end of file
diff --git a/debian/gudhui.install b/debian/gudhui.install
new file mode 100644
index 00000000..9f140378
--- /dev/null
+++ b/debian/gudhui.install
@@ -0,0 +1 @@
+debian/tmp/usr/bin/gudhui
diff --git a/debian/libgudhi-dev.docs b/debian/libgudhi-dev.docs
new file mode 100644
index 00000000..e9849ee8
--- /dev/null
+++ b/debian/libgudhi-dev.docs
@@ -0,0 +1 @@
+biblio
+\ No newline at end of file
diff --git a/debian/libgudhi-dev.install b/debian/libgudhi-dev.install
new file mode 100644
index 00000000..3035131d
--- /dev/null
+++ b/debian/libgudhi-dev.install
@@ -0,0 +1,2 @@
+debian/tmp/usr/include/gudhi/ usr/include/
+debian/tmp/usr/share/gudhi/*.cmake usr/lib/cmake/gudhi/
diff --git a/debian/libgudhi-doc.install b/debian/libgudhi-doc.install
new file mode 100644
index 00000000..e3362a5f
--- /dev/null
+++ b/debian/libgudhi-doc.install
@@ -0,0 +1 @@
+doc/html/* usr/share/doc/libgudhi/html/
+\ No newline at end of file
diff --git a/debian/libgudhi-examples.docs b/debian/libgudhi-examples.docs
new file mode 100644
index 00000000..dbf60533
--- /dev/null
+++ b/debian/libgudhi-examples.docs
@@ -0,0 +1 @@
+debian/tmp/usr/share/doc/libgudhi-examples/*
+\ No newline at end of file
diff --git a/debian/libgudhi-examples.install b/debian/libgudhi-examples.install
new file mode 100644
index 00000000..c1e7a4f5
--- /dev/null
+++ b/debian/libgudhi-examples.install
@@ -0,0 +1 @@
+debian/tmp/usr/bin/libgudhi-example-*
diff --git a/debian/patches/0001-Force-Python-3-detection-to-avoid-mixing-2-and-3.patch b/debian/patches/0001-Force-Python-3-detection-to-avoid-mixing-2-and-3.patch
new file mode 100644
index 00000000..b6e05ed7
--- /dev/null
+++ b/debian/patches/0001-Force-Python-3-detection-to-avoid-mixing-2-and-3.patch
@@ -0,0 +1,36 @@
+From e92363ab8125cff24a9c2ef5eec159ff09afc381 Mon Sep 17 00:00:00 2001
+From: Gard Spreemann <gspreemann@gmail.com>
+Date: Mon, 9 Oct 2017 11:46:06 +0200
+Subject: [PATCH 1/4] Force Python 3 detection to avoid mixing 2 and 3.
+
+---
+ cmake/modules/FindCython.cmake | 6 +++---
+ 1 file changed, 3 insertions(+), 3 deletions(-)
+
+diff --git a/cmake/modules/FindCython.cmake b/cmake/modules/FindCython.cmake
+index 04aed1f..f3a5b7b 100644
+--- a/cmake/modules/FindCython.cmake
++++ b/cmake/modules/FindCython.cmake
+@@ -24,16 +24,16 @@
+ 
+ # Use the Cython executable that lives next to the Python executable
+ # if it is a local installation.
+-find_package( PythonInterp )
++find_package( PythonInterp 3 )
+ if( PYTHONINTERP_FOUND )
+   get_filename_component( _python_path ${PYTHON_EXECUTABLE} PATH )
+   find_program( CYTHON_EXECUTABLE
+-    NAMES cython cython.bat cython3
++    NAMES cython3
+     HINTS ${_python_path}
+     )
+ else()
+   find_program( CYTHON_EXECUTABLE
+-    NAMES cython cython.bat cython3
++    NAMES cython3
+     )
+ endif()
+ 
+-- 
+2.11.0
+
diff --git a/debian/patches/0002-Disable-the-Sphinx-test.-We-re-not-using-it-as-it-re.patch b/debian/patches/0002-Disable-the-Sphinx-test.-We-re-not-using-it-as-it-re.patch
new file mode 100644
index 00000000..2eb76f06
--- /dev/null
+++ b/debian/patches/0002-Disable-the-Sphinx-test.-We-re-not-using-it-as-it-re.patch
@@ -0,0 +1,32 @@
+From 2511e115a28311263e7ed85e98296c6af12ea960 Mon Sep 17 00:00:00 2001
+From: Gard Spreemann <gspreemann@gmail.com>
+Date: Mon, 9 Oct 2017 12:05:01 +0200
+Subject: [PATCH 2/4] Disable the Sphinx test. We're not using it, as it
+ requires the Sphinx bibtex module (#800358).
+
+---
+ cython/CMakeLists.txt | 8 ++++----
+ 1 file changed, 4 insertions(+), 4 deletions(-)
+
+diff --git a/cython/CMakeLists.txt b/cython/CMakeLists.txt
+index afca9d6..ec3cb8f 100644
+--- a/cython/CMakeLists.txt
++++ b/cython/CMakeLists.txt
+@@ -305,10 +305,10 @@ if(CYTHON_FOUND)
+         DEPENDS "${CMAKE_CURRENT_BINARY_DIR}/gudhi.so"
+         COMMENT "${GUDHI_SPHINX_MESSAGE}" VERBATIM)
+ 
+-    add_test(NAME sphinx_py_test
+-             WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+-             COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
+-             ${SPHINX_PATH} -b doctest ${CMAKE_CURRENT_SOURCE_DIR}/doc ${CMAKE_CURRENT_BINARY_DIR}/doctest)
++#    add_test(NAME sphinx_py_test
++#             WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
++#             COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
++#             ${SPHINX_PATH} -b doctest ${CMAKE_CURRENT_SOURCE_DIR}/doc ${CMAKE_CURRENT_BINARY_DIR}/doctest)
+ 
+   endif(SPHINX_PATH AND NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.8.1)
+ endif(CYTHON_FOUND)
+-- 
+2.11.0
+
diff --git a/debian/patches/0003-Disable-tests-that-use-DFSG-deleted-data-files.patch b/debian/patches/0003-Disable-tests-that-use-DFSG-deleted-data-files.patch
new file mode 100644
index 00000000..eade3da7
--- /dev/null
+++ b/debian/patches/0003-Disable-tests-that-use-DFSG-deleted-data-files.patch
@@ -0,0 +1,63 @@
+From f31347031ea99c60d11064ec28bc27805b5c28b9 Mon Sep 17 00:00:00 2001
+From: Gard Spreemann <gspreemann@gmail.com>
+Date: Mon, 9 Oct 2017 14:15:02 +0200
+Subject: [PATCH 3/4] Disable tests that use DFSG-deleted data files.
+
+---
+ example/Persistent_cohomology/CMakeLists.txt | 8 ++++----
+ example/Simplex_tree/CMakeLists.txt          | 4 ++--
+ example/common/CMakeLists.txt                | 4 ++--
+ 3 files changed, 8 insertions(+), 8 deletions(-)
+
+diff --git a/example/Persistent_cohomology/CMakeLists.txt b/example/Persistent_cohomology/CMakeLists.txt
+index f47de4c..8f11ea0 100644
+--- a/example/Persistent_cohomology/CMakeLists.txt
++++ b/example/Persistent_cohomology/CMakeLists.txt
+@@ -41,10 +41,10 @@ add_test(NAME Persistent_cohomology_example_from_rips_step_by_step_on_tore_3D CO
+     "${CMAKE_SOURCE_DIR}/data/points/tore3D_1307.off" "-r" "0.25" "-m" "0.5" "-d" "3" "-p" "3")
+ add_test(NAME Persistent_cohomology_example_via_boundary_matrix COMMAND $<TARGET_FILE:rips_persistence_via_boundary_matrix>
+     "${CMAKE_SOURCE_DIR}/data/points/Kl.off" "-r" "0.16" "-d" "3" "-p" "3" "-m" "100")
+-add_test(NAME Persistent_cohomology_example_from_file_3_2_0 COMMAND $<TARGET_FILE:persistence_from_file>
+-    "${CMAKE_SOURCE_DIR}/data/filtered_simplicial_complex/bunny_5000_complex.fsc" "-p" "2" "-m" "0")
+-add_test(NAME Persistent_cohomology_example_from_file_3_3_100 COMMAND $<TARGET_FILE:persistence_from_file>
+-    "${CMAKE_SOURCE_DIR}/data/filtered_simplicial_complex/bunny_5000_complex.fsc" "-p" "3" "-m" "100")
++#add_test(NAME Persistent_cohomology_example_from_file_3_2_0 COMMAND $<TARGET_FILE:persistence_from_file>
++#    "${CMAKE_SOURCE_DIR}/data/filtered_simplicial_complex/bunny_5000_complex.fsc" "-p" "2" "-m" "0")
++#add_test(NAME Persistent_cohomology_example_from_file_3_3_100 COMMAND $<TARGET_FILE:persistence_from_file>
++#    "${CMAKE_SOURCE_DIR}/data/filtered_simplicial_complex/bunny_5000_complex.fsc" "-p" "3" "-m" "100")
+ 
+ install(TARGETS plain_homology DESTINATION bin)
+ install(TARGETS persistence_from_simple_simplex_tree DESTINATION bin)
+diff --git a/example/Simplex_tree/CMakeLists.txt b/example/Simplex_tree/CMakeLists.txt
+index e22cc92..99da80f 100644
+--- a/example/Simplex_tree/CMakeLists.txt
++++ b/example/Simplex_tree/CMakeLists.txt
+@@ -30,8 +30,8 @@ if(GMP_FOUND AND CGAL_FOUND)
+   if (TBB_FOUND)
+     target_link_libraries(Simplex_tree_example_alpha_shapes_3_from_off ${TBB_LIBRARIES})
+   endif()
+-  add_test(NAME Simplex_tree_example_alpha_shapes_3_from_off COMMAND $<TARGET_FILE:Simplex_tree_example_alpha_shapes_3_from_off>
+-      "${CMAKE_SOURCE_DIR}/data/points/bunny_5000.off")
++#  add_test(NAME Simplex_tree_example_alpha_shapes_3_from_off COMMAND $<TARGET_FILE:Simplex_tree_example_alpha_shapes_3_from_off>
++#      "${CMAKE_SOURCE_DIR}/data/points/bunny_5000.off")
+ 
+   install(TARGETS Simplex_tree_example_alpha_shapes_3_from_off DESTINATION bin)
+ 
+diff --git a/example/common/CMakeLists.txt b/example/common/CMakeLists.txt
+index afe865d..2ad4a64 100644
+--- a/example/common/CMakeLists.txt
++++ b/example/common/CMakeLists.txt
+@@ -3,8 +3,8 @@ project(Common_examples)
+ 
+ add_executable ( vector_double_off_reader example_vector_double_points_off_reader.cpp )
+ target_link_libraries(vector_double_off_reader ${CGAL_LIBRARY})
+-add_test(NAME Common_example_vector_double_off_reader COMMAND $<TARGET_FILE:vector_double_off_reader>
+-    "${CMAKE_SOURCE_DIR}/data/points/SO3_10000.off")
++#add_test(NAME Common_example_vector_double_off_reader COMMAND $<TARGET_FILE:vector_double_off_reader>
++#    "${CMAKE_SOURCE_DIR}/data/points/SO3_10000.off")
+ 
+ install(TARGETS vector_double_off_reader DESTINATION bin)
+ 
+-- 
+2.11.0
+
diff --git a/debian/patches/0004-Use-system-MathJax.patch b/debian/patches/0004-Use-system-MathJax.patch
new file mode 100644
index 00000000..916d23b9
--- /dev/null
+++ b/debian/patches/0004-Use-system-MathJax.patch
@@ -0,0 +1,25 @@
+From 46fdbaf1a91c320d7f731d061ef6d8d6da73232a Mon Sep 17 00:00:00 2001
+From: Gard Spreemann <gspreemann@gmail.com>
+Date: Mon, 9 Oct 2017 16:06:36 +0200
+Subject: [PATCH 4/4] Use system MathJax.
+
+---
+ Doxyfile | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/Doxyfile b/Doxyfile
+index 0ef81e5..51df82e 100644
+--- a/Doxyfile
++++ b/Doxyfile
+@@ -1450,7 +1450,7 @@ MATHJAX_FORMAT         = HTML-CSS
+ # The default value is: http://cdn.mathjax.org/mathjax/latest.
+ # This tag requires that the tag USE_MATHJAX is set to YES.
+ 
+-MATHJAX_RELPATH        = ../common
++MATHJAX_RELPATH        = /usr/share/javascript/mathjax
+ 
+ # The MATHJAX_EXTENSIONS tag can be used to specify one or more MathJax
+ # extension names that should be enabled during MathJax rendering. For example
+-- 
+2.11.0
+
diff --git a/debian/patches/series b/debian/patches/series
new file mode 100644
index 00000000..d1117f4a
--- /dev/null
+++ b/debian/patches/series
@@ -0,0 +1,4 @@
+0001-Force-Python-3-detection-to-avoid-mixing-2-and-3.patch
+0002-Disable-the-Sphinx-test.-We-re-not-using-it-as-it-re.patch
+0003-Disable-tests-that-use-DFSG-deleted-data-files.patch
+0004-Use-system-MathJax.patch
diff --git a/debian/python3-gudhi.install b/debian/python3-gudhi.install
new file mode 100644
index 00000000..22b018bc
--- /dev/null
+++ b/debian/python3-gudhi.install
@@ -0,0 +1 @@
+build/cython/gudhi*.so usr/lib/python3/dist-packages/
diff --git a/debian/rules b/debian/rules
new file mode 100755
index 00000000..73d0e213
--- /dev/null
+++ b/debian/rules
@@ -0,0 +1,33 @@
+#!/usr/bin/make -f
+
+export DEB_BUILD_MAINT_OPTIONS = hardening=+all
+CPPFLAGS:=$(shell dpkg-buildflags --get CPPFLAGS)
+CXXFLAGS:=$(shell dpkg-buildflags --get CXXFLAGS)
+LDFLAGS:=$(shell dpkg-buildflags --get LDFLAGS)
+
+%:
+# The --buildirectory=build is there so that we can easily get a hold
+# of documentation and examples, which are not installed by upstream.
+	dh $@ --with=python3 --builddirectory=build
+
+override_dh_auto_configure:
+	dh_auto_configure -- -DWITH_GUDHI_BENCHMARK=true -DWITH_GUDHI_EXAMPLE=true -DWITH_GUDHI_PYTHON=true -DWITH_GUDHI_TEST=true -DWITH_GUDHI_UTILITIES=true
+
+override_dh_auto_clean:
+	rm -f GUDHIVersion.cmake
+	rm -rf doc/html
+	dh_auto_clean --builddirectory=build
+
+override_dh_auto_build:
+	make -C build doxygen
+	dh_auto_build --builddirectory=build
+
+override_dh_auto_test:
+	dh_auto_test --no-parallel --builddirectory=build
+
+override_dh_auto_install:
+	find build/example -executable -type f -exec sh -c 'install -D $$0 debian/tmp/usr/bin/libgudhi-example-$$(basename $$0)' {} \;
+	find example -type f \( -name '*.cpp' -o \( -name '*.txt' -a ! -iname 'cmake*' \) \) -exec sh -c 'install -D -m 644 $$0 debian/tmp/usr/share/doc/libgudhi-examples/$$0' {} \;
+	install -D build/GudhUI/GudhUI debian/tmp/usr/bin/gudhui
+	dh_auto_install --builddirectory=build
+
diff --git a/debian/source/format b/debian/source/format
new file mode 100644
index 00000000..163aaf8d
--- /dev/null
+++ b/debian/source/format
@@ -0,0 +1 @@
+3.0 (quilt)
diff --git a/debian/tests/control b/debian/tests/control
new file mode 100644
index 00000000..49eabb3f
--- /dev/null
+++ b/debian/tests/control
@@ -0,0 +1,2 @@
+Tests: python-upstream
+Depends: python3-gudhi, python3-pytest
+\ No newline at end of file
diff --git a/debian/tests/python-upstream b/debian/tests/python-upstream
new file mode 100755
index 00000000..ed1c6027
--- /dev/null
+++ b/debian/tests/python-upstream
@@ -0,0 +1,19 @@
+#!/usr/bin/python3 -B
+
+import pytest
+import os
+
+tmpdir = os.getenv("AUTOPKGTEST_TMP")
+
+if tmpdir is None:
+    print("Need the environment variable AUTOPKGTEST_TMP.")
+    exit(1)
+
+cwd = os.getcwd()
+test_path = cwd + "/cython/test"
+
+os.chdir(tmpdir)
+
+print("Running tests from %s with cwd %s." %(test_path, os.getcwd()))
+
+exit(pytest.main([test_path]))
diff --git a/debian/watch b/debian/watch
new file mode 100644
index 00000000..d518384a
--- /dev/null
+++ b/debian/watch
@@ -0,0 +1,5 @@
+version=3
+
+opts="dversionmangle=s/\+dfsg(\.\d+)?$//,filenamemangle=s/\S+\/v?(\S+)\.tar\.gz/gudhi-$1\.tar\.gz/" \
+   https://gforge.inria.fr/frs/?group_id=3865 \
+   .*\/.*GUDHI_(\d[\d.-]*)\.tar\.gz