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diff --git a/GudhUI/utils/Furthest_point_epsilon_net.h b/GudhUI/utils/Furthest_point_epsilon_net.h
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-/* This file is part of the Gudhi Library. The Gudhi library
- * (Geometric Understanding in Higher Dimensions) is a generic C++
- * library for computational topology.
- *
- * Author(s): David Salinas
- *
- * Copyright (C) 2014 Inria
- *
- * This program is free software: you can redistribute it and/or modify
- * it under the terms of the GNU General Public License as published by
- * the Free Software Foundation, either version 3 of the License, or
- * (at your option) any later version.
- *
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- * GNU General Public License for more details.
- *
- * You should have received a copy of the GNU General Public License
- * along with this program. If not, see <http://www.gnu.org/licenses/>.
- *
- */
-
-#ifndef UTILS_FURTHEST_POINT_EPSILON_NET_H_
-#define UTILS_FURTHEST_POINT_EPSILON_NET_H_
-
-#include <vector>
-#include <algorithm> // for sort
-
-#include "utils/UI_utils.h"
-
-/**
- * Computes an epsilon net with furthest point strategy.
- */
-template<typename SkBlComplex> class Furthest_point_epsilon_net {
- private:
- SkBlComplex& complex_;
- typedef typename SkBlComplex::Vertex_handle Vertex_handle;
- typedef typename SkBlComplex::Edge_handle Edge_handle;
-
- /**
- * Let V be the set of vertices.
- * Initially v0 is one arbitrarly vertex and the set V0 is {v0}.
- * Then Vk is computed as follows.
- * First we compute the vertex pk that is the furthest from Vk
- * then Vk = Vk \cup pk.
- * The radius of pk is its distance to Vk and its meeting vertex
- * is the vertex of Vk for which this distance is achieved.
- */
- struct Net_filtration_vertex {
- Vertex_handle vertex_handle;
- Vertex_handle meeting_vertex;
- double radius;
-
- Net_filtration_vertex(Vertex_handle vertex_handle_,
- Vertex_handle meeting_vertex_,
- double radius_) :
- vertex_handle(vertex_handle_), meeting_vertex(meeting_vertex_), radius(radius_) { }
-
- bool operator<(const Net_filtration_vertex& other) const {
- return radius < other.radius;
- }
- };
-
- public:
- std::vector<Net_filtration_vertex> net_filtration_;
-
- /**
- * @brief Modify complex to be the expansion of the k-nearest neighbor
- * symetric graph.
- */
- Furthest_point_epsilon_net(SkBlComplex& complex) :
- complex_(complex) {
- if (!complex.empty()) {
- init_filtration();
- for (std::size_t k = 2; k < net_filtration_.size(); ++k) {
- update_radius_value(k);
- }
- }
- }
-
- // xxx does not work if complex not full
-
- double radius(Vertex_handle v) {
- return net_filtration_[v.vertex].radius;
- }
-
- private:
- void init_filtration() {
- Vertex_handle v0 = *(complex_.vertex_range().begin());
- net_filtration_.reserve(complex_.num_vertices());
- for (auto v : complex_.vertex_range()) {
- if (v != v0)
- net_filtration_.push_back(Net_filtration_vertex(v,
- Vertex_handle(-1),
- squared_eucl_distance(v, v0)));
- }
- net_filtration_.push_back(Net_filtration_vertex(v0, Vertex_handle(-1), 1e10));
- auto n = net_filtration_.size();
- sort_filtration(n - 1);
- }
-
- void update_radius_value(int k) {
- int n = net_filtration_.size();
- int index_to_update = n - k;
- for (int i = 0; i < index_to_update; ++i) {
- net_filtration_[i].radius = (std::min)(net_filtration_[i].radius,
- squared_eucl_distance(net_filtration_[i].vertex_handle,
- net_filtration_[index_to_update].vertex_handle));
- }
- sort_filtration(n - k);
- }
-
- /**
- * sort all i first elements.
- */
- void sort_filtration(int i) {
- std::sort(net_filtration_.begin(), net_filtration_.begin() + i);
- }
-
- double squared_eucl_distance(Vertex_handle v1, Vertex_handle v2) const {
- return std::sqrt(Geometry_trait::Squared_distance_d()(complex_.point(v1), complex_.point(v2)));
- }
-
- void print_filtration() const {
- for (auto v : net_filtration_) {
- std::cerr << "v=" << v.vertex_handle << "-> d=" << v.radius << std::endl;
- }
- }
-};
-
-#endif // UTILS_FURTHEST_POINT_EPSILON_NET_H_