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Diffstat (limited to 'cython/doc/cubical_complex_user.rst')
| -rw-r--r-- | cython/doc/cubical_complex_user.rst | 20 |
1 files changed, 11 insertions, 9 deletions
diff --git a/cython/doc/cubical_complex_user.rst b/cython/doc/cubical_complex_user.rst index 344b9554..2bfac62a 100644 --- a/cython/doc/cubical_complex_user.rst +++ b/cython/doc/cubical_complex_user.rst @@ -59,7 +59,7 @@ directions, allows to determine, dimension, neighborhood, boundary and coboundar :math:`C \in \mathcal{K}`. .. figure:: - img/Cubical_complex_representation.png + ../../doc/Bitmap_cubical_complex/Cubical_complex_representation.png :alt: Cubical complex. :figclass: align-center @@ -87,7 +87,7 @@ in the example below). Next, in lexicographical order, the filtration of top dim 20 4 7 6 5 in the example below). .. figure:: - img/exampleBitmap.png + ../../doc/Bitmap_cubical_complex/exampleBitmap.png :alt: Example of a input data. :figclass: align-center @@ -95,14 +95,15 @@ in the example below). Next, in lexicographical order, the filtration of top dim The input file for the following complex is: -.. literalinclude:: cubicalcomplexdoc.txt +.. literalinclude:: ../../data/bitmap/cubicalcomplexdoc.txt -.. centered:: cubicalcomplexdoc.txt +.. centered:: ../../data/bitmap/cubicalcomplexdoc.txt .. testcode:: import gudhi - cubical_complex = gudhi.CubicalComplex(perseus_file='cubicalcomplexdoc.txt') + cubical_complex = gudhi.CubicalComplex(perseus_file=gudhi.__root_source_dir__ + \ + '/data/bitmap/cubicalcomplexdoc.txt') result_str = 'Cubical complex is of dimension ' + repr(cubical_complex.dimension()) + ' - ' + \ repr(cubical_complex.num_simplices()) + ' simplices.' print(result_str) @@ -127,16 +128,17 @@ complex with periodic boundary conditions. One can also use Perseus style input conditions in a given direction, then number of top dimensional cells in this direction have to be multiplied by -1. For instance: -.. literalinclude:: periodiccubicalcomplexdoc.txt +.. literalinclude:: ../../data/bitmap/periodiccubicalcomplexdoc.txt -.. centered:: periodiccubicalcomplexdoc.txt +.. centered:: ../../data/bitmap/periodiccubicalcomplexdoc.txt Indicate that we have imposed periodic boundary conditions in the direction x, but not in the direction y. .. testcode:: import gudhi - periodic_cc = gudhi.PeriodicCubicalComplex(perseus_file='periodiccubicalcomplexdoc.txt') + periodic_cc = gudhi.PeriodicCubicalComplex(perseus_file=gudhi.__root_source_dir__ + \ + '/data/bitmap/periodiccubicalcomplexdoc.txt') result_str = 'Periodic cubical complex is of dimension ' + repr(periodic_cc.dimension()) + ' - ' + \ repr(periodic_cc.num_simplices()) + ' simplices.' print(result_str) @@ -155,6 +157,6 @@ End user programs are available in cython/example/ folder. Bibliography ============ -.. bibliography:: bibliography.bib +.. bibliography:: ../../bibliography.bib :filter: docnames :style: unsrt |