1 files changed, 79 insertions, 0 deletions
diff --git a/debian/patches/0002-Disable-tests-that-use-DFSG-deleted-data-files.patch b/debian/patches/0002-Disable-tests-that-use-DFSG-deleted-data-files.patch
new file mode 100644
index 00000000..6dff318d
--- /dev/null
+++ b/debian/patches/0002-Disable-tests-that-use-DFSG-deleted-data-files.patch
@@ -0,0 +1,79 @@
+From: Gard Spreemann <gspreemann@gmail.com>
+Date: Mon, 10 Sep 2018 05:17:29 +0200
+Subject: Disable tests that use DFSG-deleted data files.
+
+---
+ example/Nerve_GIC/CMakeLists.txt             | 6 ------
+ example/Persistent_cohomology/CMakeLists.txt | 4 ----
+ example/Simplex_tree/CMakeLists.txt          | 2 --
+ utilities/Nerve_GIC/CMakeLists.txt           | 8 --------
+ 4 files changed, 20 deletions(-)
+
+diff --git a/example/Nerve_GIC/CMakeLists.txt b/example/Nerve_GIC/CMakeLists.txt
+index fdecf86..f63e08e 100644
+--- a/example/Nerve_GIC/CMakeLists.txt
++++ b/example/Nerve_GIC/CMakeLists.txt
+@@ -12,16 +12,10 @@ if (NOT CGAL_VERSION VERSION_LESS 4.8.1)
+ 
+   # Copy files for not to pollute sources when testing
+   file(COPY "${CMAKE_SOURCE_DIR}/data/points/tore3D_1307.off" DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/)
+-  file(COPY "${CMAKE_SOURCE_DIR}/data/points/COIL_database/lucky_cat.off" DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/)
+-  file(COPY "${CMAKE_SOURCE_DIR}/data/points/COIL_database/lucky_cat_PCA1" DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/)
+ 
+   add_test(NAME Nerve_GIC_example_CoordGIC COMMAND $<TARGET_FILE:CoordGIC>
+       "${CMAKE_CURRENT_BINARY_DIR}/tore3D_1307.off" "0")
+ 
+-  add_test(NAME Nerve_GIC_example_FuncGIC COMMAND $<TARGET_FILE:FuncGIC>
+-      "${CMAKE_CURRENT_BINARY_DIR}/lucky_cat.off"
+-      "${CMAKE_CURRENT_BINARY_DIR}/lucky_cat_PCA1")
+-
+   install(TARGETS CoordGIC DESTINATION bin)
+   install(TARGETS FuncGIC DESTINATION bin)
+ 
+diff --git a/example/Persistent_cohomology/CMakeLists.txt b/example/Persistent_cohomology/CMakeLists.txt
+index 0f73151..4cac586 100644
+--- a/example/Persistent_cohomology/CMakeLists.txt
++++ b/example/Persistent_cohomology/CMakeLists.txt
+@@ -28,10 +28,6 @@ add_test(NAME Persistent_cohomology_example_from_rips_step_by_step_on_tore_3D CO
+     "${CMAKE_SOURCE_DIR}/data/points/tore3D_1307.off" "-r" "0.25" "-m" "0.5" "-d" "3" "-p" "3")
+ add_test(NAME Persistent_cohomology_example_via_boundary_matrix COMMAND $<TARGET_FILE:rips_persistence_via_boundary_matrix>
+     "${CMAKE_SOURCE_DIR}/data/points/Kl.off" "-r" "0.16" "-d" "3" "-p" "3" "-m" "100")
+-add_test(NAME Persistent_cohomology_example_from_file_3_2_0 COMMAND $<TARGET_FILE:persistence_from_file>
+-    "${CMAKE_SOURCE_DIR}/data/filtered_simplicial_complex/bunny_5000_complex.fsc" "-p" "2" "-m" "0")
+-add_test(NAME Persistent_cohomology_example_from_file_3_3_100 COMMAND $<TARGET_FILE:persistence_from_file>
+-    "${CMAKE_SOURCE_DIR}/data/filtered_simplicial_complex/bunny_5000_complex.fsc" "-p" "3" "-m" "100")
+ 
+ install(TARGETS plain_homology DESTINATION bin)
+ install(TARGETS persistence_from_simple_simplex_tree DESTINATION bin)
+diff --git a/example/Simplex_tree/CMakeLists.txt b/example/Simplex_tree/CMakeLists.txt
+index 857e851..48bb069 100644
+--- a/example/Simplex_tree/CMakeLists.txt
++++ b/example/Simplex_tree/CMakeLists.txt
+@@ -29,8 +29,6 @@ if(GMP_FOUND AND CGAL_FOUND)
+   if (TBB_FOUND)
+     target_link_libraries(Simplex_tree_example_alpha_shapes_3_from_off ${TBB_LIBRARIES})
+   endif()
+-  add_test(NAME Simplex_tree_example_alpha_shapes_3_from_off COMMAND $<TARGET_FILE:Simplex_tree_example_alpha_shapes_3_from_off>
+-      "${CMAKE_SOURCE_DIR}/data/points/bunny_5000.off")
+ 
+   install(TARGETS Simplex_tree_example_alpha_shapes_3_from_off DESTINATION bin)
+ 
+diff --git a/utilities/Nerve_GIC/CMakeLists.txt b/utilities/Nerve_GIC/CMakeLists.txt
+index 215f9df..20aeb8e 100644
+--- a/utilities/Nerve_GIC/CMakeLists.txt
++++ b/utilities/Nerve_GIC/CMakeLists.txt
+@@ -11,14 +11,6 @@ if (NOT CGAL_VERSION VERSION_LESS 4.8.1)
+   endif()
+ 
+   file(COPY KeplerMapperVisuFromTxtFile.py km.py DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/)
+-  # Copy files for not to pollute sources when testing
+-  file(COPY "${CMAKE_SOURCE_DIR}/data/points/human.off" DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/)
+-
+-  add_test(NAME Nerve_GIC_utilities_nerve COMMAND $<TARGET_FILE:Nerve>
+-      "human.off" "2" "10" "0.3")
+-
+-  add_test(NAME Nerve_GIC_utilities_VoronoiGIC COMMAND $<TARGET_FILE:VoronoiGIC>
+-      "human.off" "100")
+ 
+   install(TARGETS Nerve DESTINATION bin)
+   install(TARGETS VoronoiGIC DESTINATION bin)