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Diffstat (limited to 'example/Persistence_representations/persistence_heat_maps.cpp')
-rw-r--r-- | example/Persistence_representations/persistence_heat_maps.cpp | 80 |
1 files changed, 0 insertions, 80 deletions
diff --git a/example/Persistence_representations/persistence_heat_maps.cpp b/example/Persistence_representations/persistence_heat_maps.cpp deleted file mode 100644 index 323b57e9..00000000 --- a/example/Persistence_representations/persistence_heat_maps.cpp +++ /dev/null @@ -1,80 +0,0 @@ -/* This file is part of the Gudhi Library. The Gudhi library - * (Geometric Understanding in Higher Dimensions) is a generic C++ - * library for computational topology. - * - * Author(s): Pawel Dlotko - * - * Copyright (C) 2016 Inria - * - * This program is free software: you can redistribute it and/or modify - * it under the terms of the GNU General Public License as published by - * the Free Software Foundation, either version 3 of the License, or - * (at your option) any later version. - * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public License - * along with this program. If not, see <http://www.gnu.org/licenses/>. - */ - -#include <gudhi/Persistence_heat_maps.h> - -#include <iostream> -#include <vector> -#include <utility> - -using constant_scaling_function = Gudhi::Persistence_representations::constant_scaling_function; -using Persistence_heat_maps = Gudhi::Persistence_representations::Persistence_heat_maps<constant_scaling_function>; - -int main(int argc, char** argv) { - // create two simple vectors with birth--death pairs: - - std::vector<std::pair<double, double> > persistence1; - std::vector<std::pair<double, double> > persistence2; - - persistence1.push_back(std::make_pair(1, 2)); - persistence1.push_back(std::make_pair(6, 8)); - persistence1.push_back(std::make_pair(0, 4)); - persistence1.push_back(std::make_pair(3, 8)); - - persistence2.push_back(std::make_pair(2, 9)); - persistence2.push_back(std::make_pair(1, 6)); - persistence2.push_back(std::make_pair(3, 5)); - persistence2.push_back(std::make_pair(6, 10)); - - // over here we define a function we sill put on a top on every birth--death pair in the persistence interval. It can - // be anything. Over here we will use standard Gaussian - std::vector<std::vector<double> > filter = Gudhi::Persistence_representations::create_Gaussian_filter(5, 1); - - // creating two heat maps. - Persistence_heat_maps hm1(persistence1, filter, false, 20, 0, 11); - Persistence_heat_maps hm2(persistence2, filter, false, 20, 0, 11); - - std::vector<Persistence_heat_maps*> vector_of_maps; - vector_of_maps.push_back(&hm1); - vector_of_maps.push_back(&hm2); - - // compute median/mean of a vector of heat maps: - Persistence_heat_maps mean; - mean.compute_mean(vector_of_maps); - Persistence_heat_maps median; - median.compute_median(vector_of_maps); - - // to compute L^1 distance between hm1 and hm2: - std::cout << "The L^1 distance is : " << hm1.distance(hm2, 1) << std::endl; - - // to average of hm1 and hm2: - std::vector<Persistence_heat_maps*> to_average; - to_average.push_back(&hm1); - to_average.push_back(&hm2); - Persistence_heat_maps av; - av.compute_average(to_average); - - // to compute scalar product of hm1 and hm2: - std::cout << "Scalar product is : " << hm1.compute_scalar_product(hm2) << std::endl; - - return 0; -} |