summaryrefslogtreecommitdiff
path: root/example/Rips_complex/example_one_skeleton_rips_from_points.cpp
diff options
context:
space:
mode:
Diffstat (limited to 'example/Rips_complex/example_one_skeleton_rips_from_points.cpp')
-rw-r--r--example/Rips_complex/example_one_skeleton_rips_from_points.cpp52
1 files changed, 52 insertions, 0 deletions
diff --git a/example/Rips_complex/example_one_skeleton_rips_from_points.cpp b/example/Rips_complex/example_one_skeleton_rips_from_points.cpp
new file mode 100644
index 00000000..a1db8910
--- /dev/null
+++ b/example/Rips_complex/example_one_skeleton_rips_from_points.cpp
@@ -0,0 +1,52 @@
+#include <gudhi/Rips_complex.h>
+#include <gudhi/Simplex_tree.h>
+#include <gudhi/distance_functions.h>
+
+#include <iostream>
+#include <string>
+#include <vector>
+#include <limits> // for std::numeric_limits
+
+int main() {
+ // Type definitions
+ using Point = std::vector<double>;
+ using Simplex_tree = Gudhi::Simplex_tree<Gudhi::Simplex_tree_options_fast_persistence>;
+ using Filtration_value = Simplex_tree::Filtration_value;
+ using Rips_complex = Gudhi::rips_complex::Rips_complex<Filtration_value>;
+
+ std::vector<Point> points;
+ points.push_back({1.0, 1.0});
+ points.push_back({7.0, 0.0});
+ points.push_back({4.0, 6.0});
+ points.push_back({9.0, 6.0});
+ points.push_back({0.0, 14.0});
+ points.push_back({2.0, 19.0});
+ points.push_back({9.0, 17.0});
+
+ // ----------------------------------------------------------------------------
+ // Init of a Rips complex from points
+ // ----------------------------------------------------------------------------
+ double threshold = 12.0;
+ Rips_complex rips_complex_from_points(points, threshold, Gudhi::Euclidean_distance());
+
+ Simplex_tree stree;
+ rips_complex_from_points.create_complex(stree, 1);
+ // ----------------------------------------------------------------------------
+ // Display information about the one skeleton Rips complex
+ // ----------------------------------------------------------------------------
+ std::cout << "Rips complex is of dimension " << stree.dimension() <<
+ " - " << stree.num_simplices() << " simplices - " <<
+ stree.num_vertices() << " vertices." << std::endl;
+
+ std::cout << "Iterator on Rips complex simplices in the filtration order, with [filtration value]:" <<
+ std::endl;
+ for (auto f_simplex : stree.filtration_simplex_range()) {
+ std::cout << " ( ";
+ for (auto vertex : stree.simplex_vertex_range(f_simplex)) {
+ std::cout << vertex << " ";
+ }
+ std::cout << ") -> " << "[" << stree.filtration(f_simplex) << "] ";
+ std::cout << std::endl;
+ }
+ return 0;
+}