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+/* This file is part of the Gudhi Library. The Gudhi library
+ * (Geometric Understanding in Higher Dimensions) is a generic C++
+ * library for computational topology.
+ *
+ * Author(s): Siargey Kachanovich
+ *
+ * Copyright (C) 2015 INRIA Sophia Antipolis-Méditerranée (France)
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or
+ * (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+#include <sys/types.h>
+#include <sys/stat.h>
+
+#include <gudhi/Simplex_tree.h>
+#include <gudhi/Witness_complex.h>
+#include <gudhi/Landmark_choice_by_random_point.h>
+#include <gudhi/reader_utils.h>
+
+#include <iostream>
+#include <fstream>
+#include <ctime>
+#include <string>
+#include <vector>
+
+typedef std::vector< Vertex_handle > typeVectorVertex;
+typedef std::vector< std::vector <double> > Point_Vector;
+
+/**
+ * \brief Customized version of read_points
+ * which takes into account a possible nbP first line
+ *
+ */
+inline void
+read_points_cust(std::string file_name, std::vector< std::vector< double > > & points) {
+ std::ifstream in_file(file_name.c_str(), std::ios::in);
+ if (!in_file.is_open()) {
+ std::cerr << "Unable to open file " << file_name << std::endl;
+ return;
+ }
+ std::string line;
+ double x;
+ while (getline(in_file, line)) {
+ std::vector< double > point;
+ std::istringstream iss(line);
+ while (iss >> x) {
+ point.push_back(x);
+ }
+ if (point.size() != 1)
+ points.push_back(point);
+ }
+ in_file.close();
+}
+
+int main(int argc, char * const argv[]) {
+ if (argc != 3) {
+ std::cerr << "Usage: " << argv[0]
+ << " path_to_point_file nbL \n";
+ return 0;
+ }
+
+ std::string file_name = argv[1];
+ int nbL = atoi(argv[2]);
+ clock_t start, end;
+
+ // Construct the Simplex Tree
+ Gudhi::Simplex_tree<> simplex_tree;
+
+ // Read the point file
+ Point_Vector point_vector;
+ read_points_cust(file_name, point_vector);
+ std::cout << "Successfully read " << point_vector.size() << " points.\n";
+ std::cout << "Ambient dimension is " << point_vector[0].size() << ".\n";
+
+ // Choose landmarks
+ start = clock();
+ std::vector<std::vector< int > > knn;
+ Gudhi::witness_complex::landmark_choice_by_random_point(point_vector, nbL, knn);
+ end = clock();
+ std::cout << "Landmark choice for " << nbL << " landmarks took "
+ << static_cast<double>(end - start) / CLOCKS_PER_SEC << " s. \n";
+
+ // Compute witness complex
+ start = clock();
+ Gudhi::witness_complex::witness_complex(knn, nbL, point_vector[0].size(), simplex_tree);
+ end = clock();
+ std::cout << "Witness complex took "
+ << static_cast<double>(end - start) / CLOCKS_PER_SEC << " s. \n";
+}