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-rw-r--r--src/Alpha_complex/example/Weighted_alpha_complex_from_points.cpp52
1 files changed, 52 insertions, 0 deletions
diff --git a/src/Alpha_complex/example/Weighted_alpha_complex_from_points.cpp b/src/Alpha_complex/example/Weighted_alpha_complex_from_points.cpp
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+++ b/src/Alpha_complex/example/Weighted_alpha_complex_from_points.cpp
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+#include <gudhi/Alpha_complex.h>
+// to construct a simplex_tree from alpha complex
+#include <gudhi/Simplex_tree.h>
+
+#include <CGAL/Epeck_d.h>
+
+#include <iostream>
+#include <vector>
+
+// Explicit dimension 2 Epeck_d kernel
+using Kernel = CGAL::Epeck_d< CGAL::Dimension_tag<3> >;
+using Bare_point = Kernel::Point_d;
+using Weighted_point = Kernel::Weighted_point_d;
+using Vector_of_points = std::vector<Weighted_point>;
+
+int main() {
+ // ----------------------------------------------------------------------------
+ // Init of a list of points and weights from a small molecule
+ // ----------------------------------------------------------------------------
+ Vector_of_points points;
+ points.emplace_back(Bare_point(1, -1, -1), 4.);
+ points.emplace_back(Bare_point(-1, 1, -1), 4.);
+ points.emplace_back(Bare_point(-1, -1, 1), 4.);
+ points.emplace_back(Bare_point(1, 1, 1), 4.);
+ points.emplace_back(Bare_point(2, 2, 2), 1.);
+
+ // ----------------------------------------------------------------------------
+ // Init of an alpha complex from the list of points
+ // ----------------------------------------------------------------------------
+ Gudhi::alpha_complex::Alpha_complex<Kernel, true> alpha_complex_from_weighted_points(points);
+
+ Gudhi::Simplex_tree<> simplex;
+ if (alpha_complex_from_weighted_points.create_complex(simplex)) {
+ // ----------------------------------------------------------------------------
+ // Display information about the alpha complex
+ // ----------------------------------------------------------------------------
+ std::clog << "Weighted alpha complex is of dimension " << simplex.dimension() <<
+ " - " << simplex.num_simplices() << " simplices - " <<
+ simplex.num_vertices() << " vertices." << std::endl;
+
+ std::clog << "Iterator on weighted alpha complex simplices in the filtration order, with [filtration value]:" << std::endl;
+ for (auto f_simplex : simplex.filtration_simplex_range()) {
+ std::clog << " ( ";
+ for (auto vertex : simplex.simplex_vertex_range(f_simplex)) {
+ std::clog << vertex << " ";
+ }
+ std::clog << ") -> " << "[" << simplex.filtration(f_simplex) << "] ";
+ std::clog << std::endl;
+ }
+ }
+ return 0;
+}