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+/* This file is part of the Gudhi Library - https://gudhi.inria.fr/ - which is released under MIT.
+ * See file LICENSE or go to https://gudhi.inria.fr/licensing/ for full license details.
+ * Author(s): Siargey Kachanovich
+ *
+ * Copyright (C) 2019 Inria
+ *
+ * Modification(s):
+ * - YYYY/MM Author: Description of the modification
+ */
+
+#ifndef IO_BUILD_MESH_FROM_CELL_COMPLEX_H_
+#define IO_BUILD_MESH_FROM_CELL_COMPLEX_H_
+
+#include <gudhi/IO/output_debug_traces_to_html.h> // for DEBUG_TRACES
+#include <gudhi/IO/Mesh_medit.h>
+
+#include <Eigen/Dense>
+
+#include <cstdlib> // for std::size_t
+#include <map>
+#include <set>
+#include <string>
+#include <utility> // for std::make_pair
+#include <algorithm> // for std::min
+
+namespace Gudhi {
+
+namespace coxeter_triangulation {
+
+struct Configuration {
+ Configuration(bool t_edges, bool t_triangles, bool t_tetrahedra, std::size_t r_edges, std::size_t r_triangles,
+ std::size_t r_tetrahedra)
+ : toggle_edges(t_edges),
+ toggle_triangles(t_triangles),
+ toggle_tetrahedra(t_tetrahedra),
+ ref_edges(r_edges),
+ ref_triangles(r_triangles),
+ ref_tetrahedra(r_tetrahedra) {}
+
+ Configuration() {}
+
+ bool toggle_edges = true, toggle_triangles = true, toggle_tetrahedra = true;
+ std::size_t ref_edges = 1, ref_triangles = 1, ref_tetrahedra = 1;
+};
+
+template <class Hasse_cell, class Simplex_cell_map>
+void populate_mesh(Mesh_medit& output, Simplex_cell_map& sc_map, Configuration configuration, std::size_t amb_d,
+ std::map<Hasse_cell*, std::size_t> vi_map) {
+ using Mesh_element_vertices = Mesh_medit::Mesh_elements::value_type::first_type;
+ std::map<Hasse_cell*, std::size_t> ci_map;
+ std::size_t index = vi_map.size() + 1; // current size of output.vertex_points
+ if (sc_map.size() >= 3)
+ for (const auto& sc_pair : sc_map[2]) {
+ Eigen::VectorXd barycenter = Eigen::VectorXd::Zero(amb_d);
+ std::set<std::size_t> vertex_indices;
+ Hasse_cell* cell = sc_pair.second;
+ for (const auto& ei_pair : cell->get_boundary())
+ for (const auto& vi_pair : ei_pair.first->get_boundary()) vertex_indices.emplace(vi_map[vi_pair.first]);
+ for (const std::size_t& v : vertex_indices) barycenter += output.vertex_points[v - 1];
+ ci_map.emplace(cell, index++);
+ output.vertex_points.emplace_back((1. / vertex_indices.size()) * barycenter);
+#ifdef DEBUG_TRACES
+ std::string vlist = " (" + std::to_string(index - 1) + ")";
+ for (const std::size_t& v : vertex_indices) vlist += " " + std::to_string(v);
+ cell_vlist_map.emplace(to_string(cell), vlist);
+#endif
+ }
+
+ if (configuration.toggle_edges && sc_map.size() >= 2)
+ for (const auto& sc_pair : sc_map[1]) {
+ Hasse_cell* edge_cell = sc_pair.second;
+ Mesh_element_vertices edge;
+ for (const auto& vi_pair : edge_cell->get_boundary()) edge.push_back(vi_map[vi_pair.first]);
+ output.edges.emplace_back(edge, configuration.ref_edges);
+#ifdef DEBUG_TRACES
+ std::string vlist;
+ for (const std::size_t& v : edge) vlist += " " + std::to_string(v);
+ cell_vlist_map.emplace(to_string(edge_cell), vlist);
+#endif
+ }
+
+ if (configuration.toggle_triangles && sc_map.size() >= 3)
+ for (const auto& sc_pair : sc_map[2]) {
+ for (const auto& ei_pair : sc_pair.second->get_boundary()) {
+ Mesh_element_vertices triangle(1, ci_map[sc_pair.second]);
+ for (const auto& vi_pair : ei_pair.first->get_boundary()) triangle.push_back(vi_map[vi_pair.first]);
+ output.triangles.emplace_back(triangle, configuration.ref_triangles);
+ }
+ }
+
+ if (configuration.toggle_tetrahedra && sc_map.size() >= 4)
+ for (const auto& sc_pair : sc_map[3]) {
+ Eigen::VectorXd barycenter = Eigen::VectorXd::Zero(amb_d);
+ std::set<std::size_t> vertex_indices;
+ Hasse_cell* cell = sc_pair.second;
+ for (const auto& ci_pair : cell->get_boundary())
+ for (const auto& ei_pair : ci_pair.first->get_boundary())
+ for (const auto& vi_pair : ei_pair.first->get_boundary()) vertex_indices.emplace(vi_map[vi_pair.first]);
+ for (const std::size_t& v : vertex_indices) barycenter += output.vertex_points[v - 1];
+ output.vertex_points.emplace_back((1. / vertex_indices.size()) * barycenter);
+#ifdef DEBUG_TRACES
+ std::string vlist = " (" + std::to_string(index) + ")";
+ for (const std::size_t& v : vertex_indices) vlist += " " + std::to_string(v);
+ cell_vlist_map.emplace(to_string(cell), vlist);
+#endif
+
+ for (const auto& ci_pair : cell->get_boundary())
+ for (const auto& ei_pair : ci_pair.first->get_boundary()) {
+ Mesh_element_vertices tetrahedron = {index, ci_map[sc_pair.second]};
+ for (const auto& vi_pair : ei_pair.first->get_boundary()) tetrahedron.push_back(vi_map[vi_pair.first]);
+ output.tetrahedra.emplace_back(tetrahedron, configuration.ref_tetrahedra);
+ }
+ index++;
+ }
+}
+
+/** @brief Builds a Gudhi::coxeter_triangulation::Mesh_medit from a Gudhi::coxeter_triangulation::Cell_complex
+ *
+ * @ingroup coxeter_triangulation
+ */
+template <class Cell_complex>
+Mesh_medit build_mesh_from_cell_complex(const Cell_complex& cell_complex,
+ Configuration i_configuration = Configuration(),
+ Configuration b_configuration = Configuration()) {
+ using Hasse_cell = typename Cell_complex::Hasse_cell;
+ Mesh_medit output;
+ std::map<Hasse_cell*, std::size_t> vi_map; // one for vertices, other for 2d-cells
+ std::size_t index = 1; // current size of output.vertex_points
+
+ if (cell_complex.cell_point_map().empty()) return output;
+ std::size_t amb_d = std::min((int)cell_complex.cell_point_map().begin()->second.size(), 3);
+
+ for (const auto& cp_pair : cell_complex.cell_point_map()) {
+#ifdef DEBUG_TRACES
+ std::string vlist;
+ vlist += " " + std::to_string(index);
+ cell_vlist_map.emplace(to_string(cp_pair.first), vlist);
+#endif
+ vi_map.emplace(cp_pair.first, index++);
+ output.vertex_points.push_back(cp_pair.second);
+ output.vertex_points.back().conservativeResize(amb_d);
+ }
+
+ populate_mesh(output, cell_complex.interior_simplex_cell_maps(), i_configuration, amb_d, vi_map);
+#ifdef DEBUG_TRACES
+ for (const auto& sc_map : cell_complex.interior_simplex_cell_maps())
+ for (const auto& sc_pair : sc_map) {
+ std::string simplex = "I" + to_string(sc_pair.first);
+ std::string cell = to_string(sc_pair.second);
+ std::string vlist = cell_vlist_map.at(cell).substr(1);
+ simplex_vlist_map.emplace(simplex, vlist);
+ }
+#endif
+ populate_mesh(output, cell_complex.boundary_simplex_cell_maps(), b_configuration, amb_d, vi_map);
+#ifdef DEBUG_TRACES
+ for (const auto& sc_map : cell_complex.boundary_simplex_cell_maps())
+ for (const auto& sc_pair : sc_map) {
+ std::string simplex = "B" + to_string(sc_pair.first);
+ std::string cell = to_string(sc_pair.second);
+ std::string vlist = cell_vlist_map.at(cell).substr(1);
+ simplex_vlist_map.emplace(simplex, vlist);
+ }
+#endif
+ return output;
+}
+
+} // namespace coxeter_triangulation
+
+} // namespace Gudhi
+
+#endif