summaryrefslogtreecommitdiff
path: root/src/Gudhi_stat/example/persistence_vectors.cpp
diff options
context:
space:
mode:
Diffstat (limited to 'src/Gudhi_stat/example/persistence_vectors.cpp')
-rw-r--r--src/Gudhi_stat/example/persistence_vectors.cpp80
1 files changed, 80 insertions, 0 deletions
diff --git a/src/Gudhi_stat/example/persistence_vectors.cpp b/src/Gudhi_stat/example/persistence_vectors.cpp
new file mode 100644
index 00000000..028d95eb
--- /dev/null
+++ b/src/Gudhi_stat/example/persistence_vectors.cpp
@@ -0,0 +1,80 @@
+/* This file is part of the Gudhi Library. The Gudhi library
+ * (Geometric Understanding in Higher Dimensions) is a generic C++
+ * library for computational topology.
+ *
+ * Author(s): Pawel Dlotko
+ *
+ * Copyright (C) 2015 INRIA (France)
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or
+ * (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+ */
+
+
+
+#include <gudhi/Persistence_vectors.h>
+#include <iostream>
+
+
+#include <gudhi/reader_utils.h>
+#include <vector>
+#include <cmath>
+#include <iomanip>
+
+using namespace Gudhi;
+using namespace Gudhi::Persistence_representations;
+
+
+
+
+int main( int argc , char** argv )
+{
+ //create two simple vectors with birth--death pairs:
+
+ std::vector< std::pair< double , double > > persistence1;
+ std::vector< std::pair< double , double > > persistence2;
+
+ persistence1.push_back( std::make_pair(1,2) );
+ persistence1.push_back( std::make_pair(6,8) );
+ persistence1.push_back( std::make_pair(0,4) );
+ persistence1.push_back( std::make_pair(3,8) );
+
+ persistence2.push_back( std::make_pair(2,9) );
+ persistence2.push_back( std::make_pair(1,6) );
+ persistence2.push_back( std::make_pair(3,5) );
+ persistence2.push_back( std::make_pair(6,10) );
+
+ //create two persistence vectors based on persistence1 and persistence2:
+ Vector_distances_in_diagram<Euclidean_distance > v1 = Vector_distances_in_diagram<Euclidean_distance >( persistence1 , std::numeric_limits<size_t>::max() );
+ Vector_distances_in_diagram<Euclidean_distance > v2 = Vector_distances_in_diagram<Euclidean_distance >( persistence2 , std::numeric_limits<size_t>::max() );
+
+ //writing to a stream:
+ std::cout << "v1 : " << v1 << std::endl;
+ std::cout << "v2 : " << v2 << std::endl;
+
+ //averages:
+ Vector_distances_in_diagram<Euclidean_distance > average;
+ average.compute_average( {&v1,&v2} );
+ std::cout << "Average : " << average << std::endl;
+
+ //computations of distances:
+ std::cout << "l^1 distance : " << v1.distance( v2 ) << std::endl;
+
+ //computations of scalar product:
+ std::cout << "Scalar product of l1 and l2 : " << v1.compute_scalar_product( v2 ) << std::endl;
+
+ //create a file with a gnuplot script:
+ v1.plot( "plot_of_vector_representation" );
+
+ return 0;
+}