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-rw-r--r--src/Nerve_GIC/example/Nerve.cpp63
1 files changed, 63 insertions, 0 deletions
diff --git a/src/Nerve_GIC/example/Nerve.cpp b/src/Nerve_GIC/example/Nerve.cpp
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+++ b/src/Nerve_GIC/example/Nerve.cpp
@@ -0,0 +1,63 @@
+#include <gudhi/GIC.h>
+
+void usage(int nbArgs, char * const progName) {
+ std::cerr << "Error: Number of arguments (" << nbArgs << ") is not correct\n";
+ std::cerr << "Usage: " << progName << " filename.off coordinate resolution gain --v \n";
+ std::cerr << " i.e.: " << progName << " ../../data/points/human.off 2 1 0.3 --v \n";
+ exit(-1); // ----- >>
+}
+
+int main(int argc, char **argv) {
+ if ((argc != 6) && (argc != 7)) usage(argc, (argv[0] - 1));
+
+ std::string off_file_name(argv[1]);
+ int coord = atoi(argv[2]);
+ double resolution = atof(argv[3]);
+ double gain = atof(argv[4]);
+ bool verb = 0; if(argc == 6) verb = 1;
+
+ // Type definitions
+ using Graph_t = boost::adjacency_list < boost::vecS, boost::vecS, boost::undirectedS,\
+ boost::property < vertex_filtration_t, Filtration_value >,\
+ boost::property < edge_filtration_t, Filtration_value > >;
+
+ // --------------------------------
+ // Init of a Nerve from an OFF file
+ // --------------------------------
+
+ Gudhi::graph_induced_complex::Graph_induced_complex GIC;
+ GIC.set_verbose(verb);
+
+ GIC.set_function_from_coordinate(coord, off_file_name);
+ GIC.set_color_from_coordinate(coord, off_file_name);
+ GIC.set_resolution_double(resolution);
+ GIC.set_gain(gain);
+ GIC.set_cover_from_function(1);
+ GIC.find_Nerve_simplices();
+ GIC.plot_with_KeplerMapper();
+
+ Simplex_tree stree; GIC.create_complex(stree);
+
+ std::streambuf* streambufffer = std::cout.rdbuf();
+ std::ostream output_stream(streambufffer);
+
+ // ----------------------------------------------------------------------------
+ // Display information about the graph induced complex
+ // ----------------------------------------------------------------------------
+
+ if(verb){
+ output_stream << "Nerve is of dimension " << stree.dimension() <<
+ " - " << stree.num_simplices() << " simplices - " <<
+ stree.num_vertices() << " vertices." << std::endl;
+
+ output_stream << "Iterator on Nerve simplices" << std::endl;
+ for (auto f_simplex : stree.filtration_simplex_range()) {
+ for (auto vertex : stree.simplex_vertex_range(f_simplex)) {
+ output_stream << vertex << " ";
+ }
+ output_stream << std::endl;
+ }
+ }
+
+ return 0;
+}