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Diffstat (limited to 'src/Persistence_representations/example/persistence_weighted_gaussian.cpp')
-rw-r--r-- | src/Persistence_representations/example/persistence_weighted_gaussian.cpp | 96 |
1 files changed, 96 insertions, 0 deletions
diff --git a/src/Persistence_representations/example/persistence_weighted_gaussian.cpp b/src/Persistence_representations/example/persistence_weighted_gaussian.cpp new file mode 100644 index 00000000..e95b9445 --- /dev/null +++ b/src/Persistence_representations/example/persistence_weighted_gaussian.cpp @@ -0,0 +1,96 @@ +/* This file is part of the Gudhi Library. The Gudhi library + * (Geometric Understanding in Higher Dimensions) is a generic C++ + * library for computational topology. + * + * Author(s): Mathieu Carriere + * + * Copyright (C) 2018 INRIA (France) + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + */ + +#include <gudhi/Persistence_weighted_gaussian.h> + +#include <iostream> +#include <vector> +#include <utility> + +using PD = std::vector<std::pair<double,double> >; +using PWG = Gudhi::Persistence_representations::Persistence_weighted_gaussian; + +int main(int argc, char** argv) { + + std::vector<std::pair<double, double> > persistence1; + std::vector<std::pair<double, double> > persistence2; + + persistence1.push_back(std::make_pair(1, 2)); + persistence1.push_back(std::make_pair(6, 8)); + persistence1.push_back(std::make_pair(0, 4)); + persistence1.push_back(std::make_pair(3, 8)); + + persistence2.push_back(std::make_pair(2, 9)); + persistence2.push_back(std::make_pair(1, 6)); + persistence2.push_back(std::make_pair(3, 5)); + persistence2.push_back(std::make_pair(6, 10)); + + PWG PWG1(persistence1); + PWG PWG2(persistence2); + double sigma = 1; + double tau = 1; + int m = 1000; + + + + // Linear PWG + + std::cout << PWG1.compute_scalar_product (PWG2, sigma, PWG::arctan_weight, m) << std::endl; + std::cout << PWG1.compute_scalar_product (PWG2, sigma, PWG::arctan_weight, -1) << std::endl; + + std::cout << PWG1.distance (PWG2, sigma, PWG::arctan_weight, m) << std::endl; + std::cout << PWG1.distance (PWG2, sigma, PWG::arctan_weight, -1) << std::endl; + + + + + + + + // Gaussian PWG + + std::cout << std::exp( -PWG1.distance (PWG2, sigma, PWG::arctan_weight, m, 2) ) / (2*tau*tau) << std::endl; + std::cout << std::exp( -PWG1.distance (PWG2, sigma, PWG::arctan_weight, -1, 2) ) / (2*tau*tau) << std::endl; + + + + + + + + // PSS + + PD pd1 = persistence1; int numpts = persistence1.size(); for(int i = 0; i < numpts; i++) pd1.emplace_back(persistence1[i].second,persistence1[i].first); + PD pd2 = persistence2; numpts = persistence2.size(); for(int i = 0; i < numpts; i++) pd2.emplace_back(persistence2[i].second,persistence2[i].first); + + PWG pwg1(pd1); + PWG pwg2(pd2); + + std::cout << pwg1.compute_scalar_product (pwg2, 2*std::sqrt(sigma), PWG::pss_weight, m) / (16*pi*sigma) << std::endl; + std::cout << pwg1.compute_scalar_product (pwg2, 2*std::sqrt(sigma), PWG::pss_weight, -1) / (16*pi*sigma) << std::endl; + + std::cout << pwg1.distance (pwg2, 2*std::sqrt(sigma), PWG::pss_weight, m) / (16*pi*sigma) << std::endl; + std::cout << pwg1.distance (pwg2, 2*std::sqrt(sigma), PWG::pss_weight, -1) / (16*pi*sigma) << std::endl; + + + return 0; +} |