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path: root/src/Persistence_representations/utilities/persistence_intervals/plot_histogram_of_intervals_lengths.cpp
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Diffstat (limited to 'src/Persistence_representations/utilities/persistence_intervals/plot_histogram_of_intervals_lengths.cpp')
-rw-r--r--src/Persistence_representations/utilities/persistence_intervals/plot_histogram_of_intervals_lengths.cpp39
1 files changed, 22 insertions, 17 deletions
diff --git a/src/Persistence_representations/utilities/persistence_intervals/plot_histogram_of_intervals_lengths.cpp b/src/Persistence_representations/utilities/persistence_intervals/plot_histogram_of_intervals_lengths.cpp
index d68f4584..ccb5b645 100644
--- a/src/Persistence_representations/utilities/persistence_intervals/plot_histogram_of_intervals_lengths.cpp
+++ b/src/Persistence_representations/utilities/persistence_intervals/plot_histogram_of_intervals_lengths.cpp
@@ -20,7 +20,6 @@
* along with this program. If not, see <http://www.gnu.org/licenses/>.
*/
-#include <gudhi/reader_utils.h>
#include <gudhi/Persistence_intervals.h>
#include <iostream>
@@ -31,30 +30,34 @@
using Persistence_intervals = Gudhi::Persistence_representations::Persistence_intervals;
int main(int argc, char** argv) {
- std::cout << "This program compute a histogram of barcode's length. A number of bins in the histogram is a parameter "
- "of this program. \n";
- if (argc != 3) {
+ std::cout << "This program computes a histogram of barcode's length. A number of bins in the histogram is a "
+ << "parameter of this program. \n";
+ if ((argc != 3) && (argc != 4)) {
std::cout << "To run this program, please provide the name of a file with persistence diagram and number of "
- "dominant intervals you would like to get \n";
- std::cout << "The third parameter of a program is the dimension of the persistence that is to be used. If your "
- "file contains only birth-death pairs, you can skip this parameter\n";
+ << "dominant intervals you would like to get. Set a negative number dominant intervals value "
+ << "If your file contains only birth-death pairs.\n"
+ << "The third parameter is the dimension of the persistence that is to be used. If your "
+ << "file contains only birth-death pairs, you can skip this parameter\n";
return 1;
}
- unsigned dimension = std::numeric_limits<unsigned>::max();
- int dim = -1;
- if (argc > 2) {
- dim = atoi(argv[2]);
+
+ unsigned dominant_interval_number = std::numeric_limits<unsigned>::max();
+ int nbr = atoi(argv[2]);
+ if (nbr >= 0) {
+ dominant_interval_number = static_cast<unsigned>(nbr);
}
- if (dim >= 0) {
- dimension = (unsigned)dim;
+
+ int persistence_dimension = -1;
+ if (argc == 4) {
+ persistence_dimension = atoi(argv[3]);
}
- Persistence_intervals p(argv[1], dimension);
- std::vector<std::pair<double, double> > dominant_intervals = p.dominant_intervals(atoi(argv[2]));
+ Persistence_intervals p(argv[1], dominant_interval_number);
+ std::vector<std::pair<double, double> > dominant_intervals = p.dominant_intervals(persistence_dimension);
std::vector<size_t> histogram = p.histogram_of_lengths(10);
std::stringstream gnuplot_script;
- gnuplot_script << argv[1] << "_Gnuplot_script";
+ gnuplot_script << argv[1] << "_GnuplotScript";
std::ofstream out;
out.open(gnuplot_script.str().c_str());
@@ -66,7 +69,9 @@ int main(int argc, char** argv) {
out << histogram[i] << std::endl;
}
out << std::endl;
- std::cout << "To visualize, open gnuplot and type: load \'" << gnuplot_script.str().c_str() << "\'" << std::endl;
out.close();
+
+ std::cout << "To visualize, install gnuplot and type the command: gnuplot -persist -e \"load \'"
+ << gnuplot_script.str().c_str() << "\'\"" << std::endl;
return 0;
}