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+/* This file is part of the Gudhi Library - https://gudhi.inria.fr/ - which is released under MIT.
+ * See file LICENSE or go to https://gudhi.inria.fr/licensing/ for full license details.
+ * Author(s): David Salinas
+ *
+ * Copyright (C) 2014 Inria
+ *
+ * Modification(s):
+ * - YYYY/MM Author: Description of the modification
+ */
+
+#ifndef SKELETON_BLOCKER_SKELETON_BLOCKER_SIMPLEX_H_
+#define SKELETON_BLOCKER_SKELETON_BLOCKER_SIMPLEX_H_
+
+#include <cassert>
+#include <iostream>
+#include <set>
+#include <vector>
+#include <initializer_list>
+#include <string>
+#include <algorithm>
+
+namespace Gudhi {
+
+namespace skeleton_blocker {
+
+/**
+ *@brief Abstract simplex used in Skeleton blockers data-structure.
+ *
+ * An abstract simplex is represented as an ordered set of T elements,
+ * each element representing a vertex.
+ *
+ * The element representing a vertex can be SkeletonBlockerDS::Vertex_handle or SkeletonBlockerDS::Root_vertex_handle.
+ *
+ *
+ */
+template<typename T>
+
+class Skeleton_blocker_simplex {
+ private:
+ std::set<T> simplex_set;
+
+ public:
+ typedef typename T::boost_vertex_handle boost_vertex_handle;
+
+ typedef T Vertex_handle;
+
+ typedef typename std::set<T>::const_iterator Simplex_vertex_const_iterator;
+ typedef typename std::set<T>::iterator Simplex_vertex_iterator;
+
+ /** @name Constructors / Destructors / Initialization
+ */
+ //@{
+
+ void clear() {
+ simplex_set.clear();
+ }
+
+ Skeleton_blocker_simplex(std::initializer_list<T>& list) {
+ std::for_each(list.begin(), list.end(), [&] (T const& elt) {
+ add_vertex(elt);
+ });
+ }
+
+ template<typename ... Args>
+ explicit Skeleton_blocker_simplex(Args ... args) {
+ add_vertices(args...);
+ }
+
+ template<typename ... Args>
+ void add_vertices(T v, Args ... args) {
+ add_vertex(v);
+ add_vertices(args...);
+ }
+
+ void add_vertices(T v) {
+ add_vertex(v);
+ }
+
+ void add_vertices() { }
+
+ /**
+ * Initialize a simplex with a string such as {0,1,2}
+ */
+ explicit Skeleton_blocker_simplex(std::string token) {
+ clear();
+ if ((token[0] == '{') && (token[token.size() - 1] == '}')) {
+ token.erase(0, 1);
+ token.erase(token.size() - 1, 1);
+ while (token.size() != 0) {
+ int coma_position = token.find_first_of(',');
+ // cout << "coma_position:"<<coma_position<<endl;
+ std::string n = token.substr(0, coma_position);
+ // cout << "token:"<<token<<endl;
+ token.erase(0, n.size() + 1);
+ add_vertex((T) (atoi(n.c_str())));
+ }
+ }
+ }
+
+ //@}
+
+ /** @name Simplex manipulation
+ */
+ //@{
+ /**
+ * Add the vertex v to the simplex:
+ * Note that adding two times the same vertex is
+ * the same that adding it once.
+ */
+ void add_vertex(T v) {
+ simplex_set.insert(v);
+ }
+
+ /**
+ * Remove the vertex v from the simplex:
+ */
+ void remove_vertex(T v) {
+ simplex_set.erase(v);
+ }
+
+ /**
+ * Intersects the simplex with the simplex a.
+ */
+ void intersection(const Skeleton_blocker_simplex & a) {
+ std::vector<T> v;
+ v.reserve((std::min)(simplex_set.size(), a.simplex_set.size()));
+
+ set_intersection(simplex_set.begin(), simplex_set.end(),
+ a.simplex_set.begin(), a.simplex_set.end(),
+ std::back_inserter(v));
+ clear();
+ for (auto i : v)
+ simplex_set.insert(i);
+ }
+
+ /**
+ * Substracts a from the simplex.
+ */
+ void difference(const Skeleton_blocker_simplex & a) {
+ std::vector<T> v;
+ v.reserve(simplex_set.size());
+
+ set_difference(simplex_set.begin(), simplex_set.end(),
+ a.simplex_set.begin(), a.simplex_set.end(),
+ std::back_inserter(v));
+
+ clear();
+ for (auto i : v)
+ simplex_set.insert(i);
+ }
+
+ /**
+ * Add vertices of a to the simplex.
+ */
+ void union_vertices(const Skeleton_blocker_simplex & a) {
+ std::vector<T> v;
+ v.reserve(simplex_set.size() + a.simplex_set.size());
+
+ set_union(simplex_set.begin(), simplex_set.end(), a.simplex_set.begin(),
+ a.simplex_set.end(), std::back_inserter(v));
+ clear();
+ simplex_set.insert(v.begin(), v.end());
+ }
+
+ typename std::set<T>::const_iterator begin() const {
+ return simplex_set.cbegin();
+ }
+
+ typename std::set<T>::const_iterator end() const {
+ return simplex_set.cend();
+ }
+
+ typename std::set<T>::const_reverse_iterator rbegin() const {
+ return simplex_set.crbegin();
+ }
+
+ typename std::set<T>::const_reverse_iterator rend() const {
+ return simplex_set.crend();
+ }
+
+ typename std::set<T>::iterator begin() {
+ return simplex_set.begin();
+ }
+
+ typename std::set<T>::iterator end() {
+ return simplex_set.end();
+ }
+
+ //@}
+
+ /** @name Queries
+ */
+ //@{
+ /**
+ * Returns the dimension of the simplex.
+ */
+ int dimension() const {
+ return (simplex_set.size() - 1);
+ }
+
+ bool empty() const {
+ return simplex_set.empty();
+ }
+
+ /**
+ * Returns the first and smallest vertex of the simplex.
+ *
+ * Be careful : assumes the simplex is non-empty.
+ */
+ T first_vertex() const {
+ assert(!empty());
+ return *(begin());
+ }
+
+ /**
+ * Returns the last and greatest vertex of the simplex.
+ *
+ * Be careful : assumes the simplex is non-empty.
+ */
+ T last_vertex() const {
+ assert(!empty());
+ return *(simplex_set.rbegin());
+ }
+
+ /**
+ * @return true iff the simplex contains the simplex a.
+ */
+ bool contains(const Skeleton_blocker_simplex & a) const {
+ return includes(simplex_set.cbegin(), simplex_set.cend(),
+ a.simplex_set.cbegin(), a.simplex_set.cend());
+ }
+
+ /**
+ * @return true iff the simplex contains the difference \f$ a \setminus b \f$.
+ */
+ bool contains_difference(const Skeleton_blocker_simplex& a,
+ const Skeleton_blocker_simplex& b) const {
+ auto first1 = begin();
+ auto last1 = end();
+
+ auto first2 = a.begin();
+ auto last2 = a.end();
+
+ while (first2 != last2) {
+ // we ignore vertices of b
+ if (b.contains(*first2)) {
+ ++first2;
+ } else {
+ if ((first1 == last1) || (*first2 < *first1))
+ return false;
+ if (!(*first1 < *first2))
+ ++first2;
+ ++first1;
+ }
+ }
+ return true;
+ }
+
+ /**
+ * @return true iff the simplex contains the difference \f$ a \setminus \{ x \} \f$.
+ */
+ bool contains_difference(const Skeleton_blocker_simplex& a, T x) const {
+ auto first1 = begin();
+ auto last1 = end();
+
+ auto first2 = a.begin();
+ auto last2 = a.end();
+
+ while (first2 != last2) {
+ // we ignore vertices x
+ if (x == *first2) {
+ ++first2;
+ } else {
+ if ((first1 == last1) || (*first2 < *first1))
+ return false;
+ if (!(*first1 < *first2))
+ ++first2;
+ ++first1;
+ }
+ }
+ return true;
+ }
+
+ /**
+ * @return true iff the simplex contains the difference \f$ a \setminus \{ x,y \} \f$.
+ */
+ bool contains_difference(const Skeleton_blocker_simplex& a, T x, T y) const {
+ auto first1 = begin();
+ auto last1 = end();
+
+ auto first2 = a.begin();
+ auto last2 = a.end();
+
+ while (first2 != last2) {
+ // we ignore vertices of x,y
+ if (x == *first2 || y == *first2) {
+ ++first2;
+ } else {
+ if ((first1 == last1) || (*first2 < *first1))
+ return false;
+ if (!(*first1 < *first2))
+ ++first2;
+ ++first1;
+ }
+ }
+ return true;
+ }
+
+ bool contains(T v) const {
+ return (simplex_set.find(v) != simplex_set.end());
+ }
+
+ bool disjoint(const Skeleton_blocker_simplex& a) const {
+ std::vector<T> v;
+ v.reserve(std::min(simplex_set.size(), a.simplex_set.size()));
+
+ set_intersection(simplex_set.cbegin(), simplex_set.cend(),
+ a.simplex_set.cbegin(), a.simplex_set.cend(),
+ std::back_inserter(v));
+
+ return (v.size() == 0);
+ }
+
+ bool operator==(const Skeleton_blocker_simplex& other) const {
+ return (this->simplex_set == other.simplex_set);
+ }
+
+ bool operator!=(const Skeleton_blocker_simplex& other) const {
+ return (this->simplex_set != other.simplex_set);
+ }
+
+ bool operator<(const Skeleton_blocker_simplex& other) const {
+ return (std::lexicographical_compare(this->simplex_set.begin(),
+ this->simplex_set.end(), other.begin(),
+ other.end()));
+ }
+
+ //@}
+
+ friend std::ostream& operator<<(std::ostream& o,
+ const Skeleton_blocker_simplex & sigma) {
+ bool first = true;
+ o << "{";
+ for (auto i : sigma) {
+ if (first)
+ first = false;
+ else
+ o << ",";
+ o << i;
+ }
+ o << "}";
+ return o;
+ }
+};
+
+} // namespace skeleton_blocker
+
+namespace skbl = skeleton_blocker;
+
+} // namespace Gudhi
+
+#endif // SKELETON_BLOCKER_SKELETON_BLOCKER_SIMPLEX_H_