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Diffstat (limited to 'src/common/include/gudhi/reader_utils.h')
-rw-r--r--src/common/include/gudhi/reader_utils.h22
1 files changed, 16 insertions, 6 deletions
diff --git a/src/common/include/gudhi/reader_utils.h b/src/common/include/gudhi/reader_utils.h
index 98335552..a7d82541 100644
--- a/src/common/include/gudhi/reader_utils.h
+++ b/src/common/include/gudhi/reader_utils.h
@@ -14,7 +14,7 @@
#include <gudhi/graph_simplicial_complex.h>
#include <gudhi/Debug_utils.h>
-#include <boost/function_output_iterator.hpp>
+# include <boost/iterator/function_output_iterator.hpp>
#include <boost/graph/adjacency_list.hpp>
#include <iostream>
@@ -220,7 +220,7 @@ template <typename Filtration_value>
std::vector<std::vector<Filtration_value>> read_lower_triangular_matrix_from_csv_file(const std::string& filename,
const char separator = ';') {
#ifdef DEBUG_TRACES
- std::cout << "Using procedure read_lower_triangular_matrix_from_csv_file \n";
+ std::clog << "Using procedure read_lower_triangular_matrix_from_csv_file \n";
#endif // DEBUG_TRACES
std::vector<std::vector<Filtration_value>> result;
std::ifstream in;
@@ -231,7 +231,7 @@ std::vector<std::vector<Filtration_value>> read_lower_triangular_matrix_from_csv
std::string line;
- // the first line is emtpy, so we ignore it:
+ // the first line is empty, so we ignore it:
std::getline(in, line);
std::vector<Filtration_value> values_in_this_line;
result.push_back(values_in_this_line);
@@ -272,12 +272,12 @@ std::vector<std::vector<Filtration_value>> read_lower_triangular_matrix_from_csv
in.close();
#ifdef DEBUG_TRACES
- std::cerr << "Here is the matrix we read : \n";
+ std::clog << "Here is the matrix we read : \n";
for (size_t i = 0; i != result.size(); ++i) {
for (size_t j = 0; j != result[i].size(); ++j) {
- std::cerr << result[i][j] << " ";
+ std::clog << result[i][j] << " ";
}
- std::cerr << std::endl;
+ std::clog << std::endl;
}
#endif // DEBUG_TRACES
@@ -293,6 +293,9 @@ Note: the function does not check that birth <= death.
**/
template <typename OutputIterator>
void read_persistence_intervals_and_dimension(std::string const& filename, OutputIterator out) {
+#ifdef DEBUG_TRACES
+ std::clog << "read_persistence_intervals_and_dimension - " << filename << std::endl;
+#endif // DEBUG_TRACES
std::ifstream in(filename);
if (!in.is_open()) {
std::string error_str("read_persistence_intervals_and_dimension - Unable to open file ");
@@ -307,6 +310,13 @@ void read_persistence_intervals_and_dimension(std::string const& filename, Outpu
if (line.length() != 0 && line[0] != '#') {
double numbers[4];
int n = sscanf(line.c_str(), "%lf %lf %lf %lf", &numbers[0], &numbers[1], &numbers[2], &numbers[3]);
+#ifdef DEBUG_TRACES
+ std::clog << "[" << n << "] = ";
+ for (int i = 0; i < n; i++) {
+ std::clog << numbers[i] << ",";
+ }
+ std::clog << std::endl;
+#endif // DEBUG_TRACES
if (n >= 2) {
int dim = (n >= 3 ? static_cast<int>(numbers[n - 3]) : -1);
*out++ = std::make_tuple(dim, numbers[n - 2], numbers[n - 1]);