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-rw-r--r--src/common/test/test_distance_matrix_reader.cpp73
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+/* This file is part of the Gudhi Library - https://gudhi.inria.fr/ - which is released under MIT.
+ * See file LICENSE or go to https://gudhi.inria.fr/licensing/ for full license details.
+ * Author(s): Vincent Rouvreau
+ *
+ * Copyright (C) 2016 Inria
+ *
+ * Modification(s):
+ * - YYYY/MM Author: Description of the modification
+ */
+
+#include <gudhi/reader_utils.h>
+
+#include <iostream>
+#include <string>
+#include <vector>
+
+#define BOOST_TEST_DYN_LINK
+#define BOOST_TEST_MODULE "distance_matrix_reader"
+#include <boost/test/unit_test.hpp>
+
+using Distance_matrix = std::vector<std::vector<double>>;
+
+BOOST_AUTO_TEST_CASE( lower_triangular_distance_matrix )
+{
+ Distance_matrix from_lower_triangular;
+ // Read lower_triangular_distance_matrix.csv file where the separator is a ','
+ from_lower_triangular = Gudhi::read_lower_triangular_matrix_from_csv_file<double>("lower_triangular_distance_matrix.csv",
+ ',');
+ for (auto& i : from_lower_triangular) {
+ for (auto j : i) {
+ std::cout << j << " ";
+ }
+ std::cout << std::endl;
+ }
+ std::cout << "from_lower_triangular size = " << from_lower_triangular.size() << std::endl;
+ BOOST_CHECK(from_lower_triangular.size() == 5);
+
+ for (std::size_t i = 0; i < from_lower_triangular.size(); i++) {
+ std::cout << "from_lower_triangular[" << i << "] size = " << from_lower_triangular[i].size() << std::endl;
+ BOOST_CHECK(from_lower_triangular[i].size() == i);
+ }
+ std::vector<double> expected = {1};
+ BOOST_CHECK(from_lower_triangular[1] == expected);
+
+ expected = {2,3};
+ BOOST_CHECK(from_lower_triangular[2] == expected);
+
+ expected = {4,5,6};
+ BOOST_CHECK(from_lower_triangular[3] == expected);
+
+ expected = {7,8,9,10};
+ BOOST_CHECK(from_lower_triangular[4] == expected);
+
+}
+
+BOOST_AUTO_TEST_CASE( full_square_distance_matrix )
+{
+ Distance_matrix from_full_square;
+ // Read full_square_distance_matrix.csv file where the separator is the default one ';'
+ from_full_square = Gudhi::read_lower_triangular_matrix_from_csv_file<double>("full_square_distance_matrix.csv");
+ for (auto& i : from_full_square) {
+ for (auto j : i) {
+ std::cout << j << " ";
+ }
+ std::cout << std::endl;
+ }
+ std::cout << "from_full_square size = " << from_full_square.size() << std::endl;
+ BOOST_CHECK(from_full_square.size() == 7);
+ for (std::size_t i = 0; i < from_full_square.size(); i++) {
+ std::cout << "from_full_square[" << i << "] size = " << from_full_square[i].size() << std::endl;
+ BOOST_CHECK(from_full_square[i].size() == i);
+ }
+}