diff options
Diffstat (limited to 'src/cython/CMakeLists.txt')
| -rw-r--r-- | src/cython/CMakeLists.txt | 30 |
1 files changed, 16 insertions, 14 deletions
diff --git a/src/cython/CMakeLists.txt b/src/cython/CMakeLists.txt index cd99f70b..12eec9d9 100644 --- a/src/cython/CMakeLists.txt +++ b/src/cython/CMakeLists.txt @@ -26,7 +26,7 @@ function( add_gudhi_py_test THE_TEST ) endfunction( add_gudhi_py_test ) # Set gudhi.__debug_info__ -# WARNING : to be done before gudhi.pyx.in configure_file +# WARNING : to be done before setup.py.in configure_file function( add_gudhi_debug_info DEBUG_INFO ) set(GUDHI_CYTHON_DEBUG_INFO "${GUDHI_CYTHON_DEBUG_INFO} \"${DEBUG_INFO}\\n\" \\\n" PARENT_SCOPE) endfunction( add_gudhi_debug_info ) @@ -94,20 +94,24 @@ if(PYTHONINTERP_FOUND) set(GUDHI_CYTHON_EXTRA_COMPILE_ARGS "${GUDHI_CYTHON_EXTRA_COMPILE_ARGS}'-DCGAL_EIGEN3_ENABLED', ") endif (EIGEN3_FOUND) + set(GUDHI_CYTHON_MODULES_TO_COMPILE "${GUDHI_CYTHON_MODULES_TO_COMPILE}'off_reader', ") + set(GUDHI_CYTHON_MODULES_TO_COMPILE "${GUDHI_CYTHON_MODULES_TO_COMPILE}'simplex_tree', ") + set(GUDHI_CYTHON_MODULES_TO_COMPILE "${GUDHI_CYTHON_MODULES_TO_COMPILE}'rips_complex', ") + set(GUDHI_CYTHON_MODULES_TO_COMPILE "${GUDHI_CYTHON_MODULES_TO_COMPILE}'cubical_complex', ") + set(GUDHI_CYTHON_MODULES_TO_COMPILE "${GUDHI_CYTHON_MODULES_TO_COMPILE}'periodic_cubical_complex', ") + set(GUDHI_CYTHON_MODULES_TO_COMPILE "${GUDHI_CYTHON_MODULES_TO_COMPILE}'reader_utils', ") + #set(GUDHI_CYTHON_MODULES_TO_COMPILE "${GUDHI_CYTHON_MODULES_TO_COMPILE}'witness_complex', ") + #set(GUDHI_CYTHON_MODULES_TO_COMPILE "${GUDHI_CYTHON_MODULES_TO_COMPILE}'strong_witness_complex', ") if (NOT CGAL_VERSION VERSION_LESS 4.11.0) - set(GUDHI_CYTHON_BOTTLENECK_DISTANCE "include '${CMAKE_CURRENT_SOURCE_DIR}/cython/bottleneck_distance.pyx'") - set(GUDHI_CYTHON_NERVE_GIC "include '${CMAKE_CURRENT_SOURCE_DIR}/cython/nerve_gic.pyx'") + #set(GUDHI_CYTHON_MODULES_TO_COMPILE "${GUDHI_CYTHON_MODULES_TO_COMPILE}'bottleneck_distance', ") + #set(GUDHI_CYTHON_MODULES_TO_COMPILE "${GUDHI_CYTHON_MODULES_TO_COMPILE}'nerve_gic', ") endif () if (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.11.0) - set(GUDHI_CYTHON_SUBSAMPLING "include '${CMAKE_CURRENT_SOURCE_DIR}/cython/subsampling.pyx'") - set(GUDHI_CYTHON_TANGENTIAL_COMPLEX "include '${CMAKE_CURRENT_SOURCE_DIR}/cython/tangential_complex.pyx'") - endif () - if (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.11.0) - set(GUDHI_CYTHON_ALPHA_COMPLEX "include '${CMAKE_CURRENT_SOURCE_DIR}/cython/alpha_complex.pyx'") - endif () - if (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.11.0) - set(GUDHI_CYTHON_EUCLIDEAN_WITNESS_COMPLEX - "include '${CMAKE_CURRENT_SOURCE_DIR}/cython/euclidean_witness_complex.pyx'\ninclude '${CMAKE_CURRENT_SOURCE_DIR}/cython/euclidean_strong_witness_complex.pyx'\n") + set(GUDHI_CYTHON_MODULES_TO_COMPILE "${GUDHI_CYTHON_MODULES_TO_COMPILE}'subsampling', ") + #set(GUDHI_CYTHON_MODULES_TO_COMPILE "${GUDHI_CYTHON_MODULES_TO_COMPILE}'tangential_complex', ") + #set(GUDHI_CYTHON_MODULES_TO_COMPILE "${GUDHI_CYTHON_MODULES_TO_COMPILE}'alpha_complex', ") + #set(GUDHI_CYTHON_MODULES_TO_COMPILE "${GUDHI_CYTHON_MODULES_TO_COMPILE}'euclidean_witness_complex', ") + #set(GUDHI_CYTHON_MODULES_TO_COMPILE "${GUDHI_CYTHON_MODULES_TO_COMPILE}'euclidean_strong_witness_complex', ") endif () if(CGAL_FOUND) @@ -190,8 +194,6 @@ if(PYTHONINTERP_FOUND) # Generate setup.py file to cythonize Gudhi - This file must be named setup.py by convention configure_file(setup.py.in "${CMAKE_CURRENT_BINARY_DIR}/setup.py" @ONLY) - # Generate gudhi.pyx - Gudhi cython file - configure_file(gudhi.pyx.in "${CMAKE_CURRENT_BINARY_DIR}/gudhi.pyx" @ONLY) # Generate gudhi/__init__.py file(MAKE_DIRECTORY "${CMAKE_CURRENT_BINARY_DIR}/gudhi") |