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-rw-r--r--src/python/doc/alpha_complex_user.rst43
1 files changed, 23 insertions, 20 deletions
diff --git a/src/python/doc/alpha_complex_user.rst b/src/python/doc/alpha_complex_user.rst
index a3b35c10..d49f45b4 100644
--- a/src/python/doc/alpha_complex_user.rst
+++ b/src/python/doc/alpha_complex_user.rst
@@ -11,8 +11,8 @@ Definition
`AlphaComplex` is constructing a :doc:`SimplexTree <simplex_tree_ref>` using
`Delaunay Triangulation <http://doc.cgal.org/latest/Triangulation/index.html#Chapter_Triangulations>`_
-:cite:`cgal:hdj-t-19b` from `CGAL <http://www.cgal.org/>`_ (the Computational Geometry Algorithms Library
-:cite:`cgal:eb-19b`).
+:cite:`cgal:hdj-t-19b` from the `Computational Geometry Algorithms Library <http://www.cgal.org/>`_
+:cite:`cgal:eb-19b`.
Remarks
^^^^^^^
@@ -89,25 +89,28 @@ In order to build the alpha complex, first, a Simplex tree is built from the cel
Filtration value computation algorithm
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
- **for** i : dimension :math:`\rightarrow` 0 **do**
- **for all** :math:`\sigma` of dimension i
- **if** filtration(:math:`\sigma`) is NaN **then**
- filtration(:math:`\sigma`) = :math:`\alpha^2(\sigma)`
- **end if**
+.. code-block:: vim
+
+ for i : dimension → 0 do
+ for all σ of dimension i
+ if filtration(σ) is NaN then
+ filtration(σ) = α²(σ)
+ end if
+ for all τ face of σ do // propagate alpha filtration value
+ if filtration(τ) is not NaN then
+ filtration(τ) = min( filtration(τ), filtration(σ) )
+ else
+ if τ is not Gabriel for σ then
+ filtration(τ) = filtration(σ)
+ end if
+ end if
+ end for
+ end for
+ end for
+
+ make_filtration_non_decreasing()
+ prune_above_filtration()
- *//propagate alpha filtration value*
-
- **for all** :math:`\tau` face of :math:`\sigma`
- **if** filtration(:math:`\tau`) is not NaN **then**
- filtration(:math:`\tau`) = filtration(:math:`\sigma`)
- **end if**
- **end for**
- **end for**
- **end for**
-
- make_filtration_non_decreasing()
-
- prune_above_filtration()
Dimension 2
^^^^^^^^^^^