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-rw-r--r--src/python/include/Alpha_complex_interface.h61
1 files changed, 34 insertions, 27 deletions
diff --git a/src/python/include/Alpha_complex_interface.h b/src/python/include/Alpha_complex_interface.h
index 40de88f3..469b91ce 100644
--- a/src/python/include/Alpha_complex_interface.h
+++ b/src/python/include/Alpha_complex_interface.h
@@ -11,57 +11,64 @@
#ifndef INCLUDE_ALPHA_COMPLEX_INTERFACE_H_
#define INCLUDE_ALPHA_COMPLEX_INTERFACE_H_
-#include <gudhi/Simplex_tree.h>
-#include <gudhi/Alpha_complex.h>
-#include <CGAL/Epeck_d.h>
-#include <CGAL/Epick_d.h>
-
-#include <boost/range/adaptor/transformed.hpp>
+#include "Alpha_complex_factory.h"
+#include <gudhi/Alpha_complex_options.h>
#include "Simplex_tree_interface.h"
#include <iostream>
#include <vector>
#include <string>
+#include <memory> // for std::unique_ptr
namespace Gudhi {
namespace alpha_complex {
class Alpha_complex_interface {
- using Dynamic_kernel = CGAL::Epeck_d< CGAL::Dynamic_dimension_tag >;
- using Point_d = Dynamic_kernel::Point_d;
-
public:
- Alpha_complex_interface(const std::vector<std::vector<double>>& points) {
- auto mkpt = [](std::vector<double> const& vec){
- return Point_d(vec.size(), vec.begin(), vec.end());
- };
- alpha_complex_ = new Alpha_complex<Dynamic_kernel>(boost::adaptors::transform(points, mkpt));
+ Alpha_complex_interface(const std::vector<std::vector<double>>& points,
+ const std::vector<double>& weights,
+ bool fast_version, bool exact_version) {
+ const bool weighted = (weights.size() > 0);
+ if (fast_version) {
+ if (weighted) {
+ alpha_ptr_ = std::make_unique<Inexact_alpha_complex_dD<true>>(points, weights);
+ } else {
+ alpha_ptr_ = std::make_unique<Inexact_alpha_complex_dD<false>>(points);
+ }
+ } else {
+ if (weighted) {
+ alpha_ptr_ = std::make_unique<Exact_alpha_complex_dD<true>>(points, weights, exact_version);
+ } else {
+ alpha_ptr_ = std::make_unique<Exact_alpha_complex_dD<false>>(points, exact_version);
+ }
+ }
}
- Alpha_complex_interface(const std::string& off_file_name, bool from_file = true) {
- alpha_complex_ = new Alpha_complex<Dynamic_kernel>(off_file_name);
+ std::vector<double> get_point(int vh) {
+ return alpha_ptr_->get_point(vh);
}
- ~Alpha_complex_interface() {
- delete alpha_complex_;
+ void create_simplex_tree(Simplex_tree_interface<>* simplex_tree, double max_alpha_square,
+ bool default_filtration_value) {
+ // Nothing to be done in case of an empty point set
+ if (alpha_ptr_->num_vertices() > 0)
+ alpha_ptr_->create_simplex_tree(simplex_tree, max_alpha_square, default_filtration_value);
}
- std::vector<double> get_point(int vh) {
- std::vector<double> vd;
- Point_d const& ph = alpha_complex_->get_point(vh);
- for (auto coord = ph.cartesian_begin(); coord != ph.cartesian_end(); coord++)
- vd.push_back(CGAL::to_double(*coord));
- return vd;
+ static void set_float_relative_precision(double precision) {
+ // cf. Exact_alpha_complex_dD kernel type in Alpha_complex_factory.h
+ CGAL::Epeck_d<CGAL::Dynamic_dimension_tag>::FT::set_relative_precision_of_to_double(precision);
}
- void create_simplex_tree(Simplex_tree_interface<>* simplex_tree, double max_alpha_square) {
- alpha_complex_->create_complex(*simplex_tree, max_alpha_square);
+ static double get_float_relative_precision() {
+ // cf. Exact_alpha_complex_dD kernel type in Alpha_complex_factory.h
+ return CGAL::Epeck_d<CGAL::Dynamic_dimension_tag>::FT::get_relative_precision_of_to_double();
}
private:
- Alpha_complex<Dynamic_kernel>* alpha_complex_;
+ std::unique_ptr<Abstract_alpha_complex> alpha_ptr_;
};
} // namespace alpha_complex