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-rw-r--r--src/python/include/Persistent_cohomology_interface.h40
1 files changed, 40 insertions, 0 deletions
diff --git a/src/python/include/Persistent_cohomology_interface.h b/src/python/include/Persistent_cohomology_interface.h
index e5a3dfba..945378a0 100644
--- a/src/python/include/Persistent_cohomology_interface.h
+++ b/src/python/include/Persistent_cohomology_interface.h
@@ -12,6 +12,8 @@
#define INCLUDE_PERSISTENT_COHOMOLOGY_INTERFACE_H_
#include <gudhi/Persistent_cohomology.h>
+#include <gudhi/Simplex_tree.h> // for Extended_simplex_type
+
#include <cstdlib>
#include <vector>
@@ -223,6 +225,44 @@ persistent_cohomology::Persistent_cohomology<FilteredComplex, persistent_cohomol
return out;
}
+ using Filtration_value = typename FilteredComplex::Filtration_value;
+ using Birth_death = std::pair<Filtration_value, Filtration_value>;
+ using Persistence_subdiagrams = std::vector<std::vector<std::pair<int, Birth_death>>>;
+
+ Persistence_subdiagrams compute_extended_persistence_subdiagrams(Filtration_value min_persistence){
+ Persistence_subdiagrams pers_subs(4);
+ auto const& persistent_pairs = Base::get_persistent_pairs();
+ for (auto pair : persistent_pairs) {
+ std::pair<Filtration_value, Extended_simplex_type> px = stptr_->decode_extended_filtration(stptr_->filtration(get<0>(pair)),
+ stptr_->efd);
+ std::pair<Filtration_value, Extended_simplex_type> py = stptr_->decode_extended_filtration(stptr_->filtration(get<1>(pair)),
+ stptr_->efd);
+ std::pair<int, Birth_death> pd_point = std::make_pair(stptr_->dimension(get<0>(pair)),
+ std::make_pair(px.first, py.first));
+ if(std::abs(px.first - py.first) > min_persistence){
+ //Ordinary
+ if (px.second == Extended_simplex_type::UP && py.second == Extended_simplex_type::UP){
+ pers_subs[0].push_back(pd_point);
+ }
+ // Relative
+ else if (px.second == Extended_simplex_type::DOWN && py.second == Extended_simplex_type::DOWN){
+ pers_subs[1].push_back(pd_point);
+ }
+ else{
+ // Extended+
+ if (px.first < py.first){
+ pers_subs[2].push_back(pd_point);
+ }
+ //Extended-
+ else{
+ pers_subs[3].push_back(pd_point);
+ }
+ }
+ }
+ }
+ return pers_subs;
+ }
+
private:
// A copy
FilteredComplex* stptr_;