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-rw-r--r--utilities/Persistence_representations/persistence_intervals/plot_histogram_of_intervals_lengths.cpp77
1 files changed, 0 insertions, 77 deletions
diff --git a/utilities/Persistence_representations/persistence_intervals/plot_histogram_of_intervals_lengths.cpp b/utilities/Persistence_representations/persistence_intervals/plot_histogram_of_intervals_lengths.cpp
deleted file mode 100644
index f283971b..00000000
--- a/utilities/Persistence_representations/persistence_intervals/plot_histogram_of_intervals_lengths.cpp
+++ /dev/null
@@ -1,77 +0,0 @@
-/* This file is part of the Gudhi Library. The Gudhi library
- * (Geometric Understanding in Higher Dimensions) is a generic C++
- * library for computational topology.
- *
- * Author(s): Pawel Dlotko
- *
- * Copyright (C) 2016 Inria
- *
- * This program is free software: you can redistribute it and/or modify
- * it under the terms of the GNU General Public License as published by
- * the Free Software Foundation, either version 3 of the License, or
- * (at your option) any later version.
- *
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- * GNU General Public License for more details.
- *
- * You should have received a copy of the GNU General Public License
- * along with this program. If not, see <http://www.gnu.org/licenses/>.
- */
-
-#include <gudhi/Persistence_intervals.h>
-
-#include <iostream>
-#include <vector>
-#include <limits>
-#include <utility>
-
-using Persistence_intervals = Gudhi::Persistence_representations::Persistence_intervals;
-
-int main(int argc, char** argv) {
- std::cout << "This program computes a histogram of barcode's length. A number of bins in the histogram is a "
- << "parameter of this program. \n";
- if ((argc != 3) && (argc != 4)) {
- std::cout << "To run this program, please provide the name of a file with persistence diagram and number of "
- << "dominant intervals you would like to get. Set a negative number dominant intervals value "
- << "If your file contains only birth-death pairs.\n"
- << "The third parameter is the dimension of the persistence that is to be used. If your "
- << "file contains only birth-death pairs, you can skip this parameter\n";
- return 1;
- }
-
- unsigned dominant_interval_number = std::numeric_limits<unsigned>::max();
- int nbr = atoi(argv[2]);
- if (nbr >= 0) {
- dominant_interval_number = static_cast<unsigned>(nbr);
- }
-
- int persistence_dimension = -1;
- if (argc == 4) {
- persistence_dimension = atoi(argv[3]);
- }
-
- Persistence_intervals p(argv[1], dominant_interval_number);
- std::vector<std::pair<double, double> > dominant_intervals = p.dominant_intervals(persistence_dimension);
- std::vector<size_t> histogram = p.histogram_of_lengths(10);
-
- std::stringstream gnuplot_script;
- gnuplot_script << argv[1] << "_GnuplotScript";
- std::ofstream out;
- out.open(gnuplot_script.str().c_str());
-
- out << "set style data histogram" << std::endl;
- out << "set style histogram cluster gap 1" << std::endl;
- out << "set style fill solid border -1" << std::endl;
- out << "plot '-' notitle" << std::endl;
- for (size_t i = 0; i != histogram.size(); ++i) {
- out << histogram[i] << std::endl;
- }
- out << std::endl;
- out.close();
-
- std::cout << "To visualize, install gnuplot and type the command: gnuplot -persist -e \"load \'"
- << gnuplot_script.str().c_str() << "\'\"" << std::endl;
- return 0;
-}