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2019-06-05Merge branch 'master' into kernelsROUVREAU Vincent
2019-05-29Citations for bottleneck distanceMarc Glisse
2019-04-26Merge branch 'master' into toplex_mapROUVREAU Vincent
2019-02-18Add biblio and doc referencesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/toplex_map@4111 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 42a6e48271d333d604cb5cb0c9c9f1e56b8f1965
2018-10-06Doc tweaks.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-python@3936 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3c75c674876bcb38d0a87de41d406832baf61b55
2018-10-02More doc changes for python sparse ripsglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-python@3921 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f9a33e3c4a6fc6d68a81b753a88ff9d39bdcfb9f
2018-08-13git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3778 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 189ac5572f69842e1d8d1cec68ca6a4f62e39bd4
2018-04-23added unitary tests for kernelsmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3391 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d383ed76f3cfd3724449cb7e8c24b895a7322d52
2018-04-04Merge sparse rips branch in trunkvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3336 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 01dcab006197637ccba9c29f8990375fe05ad7b4
2018-02-15integrated kernel code in pers_representation branchmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3249 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 58e77263a0da3674e4699cef832b6d357dcf12e2
2018-02-01Add myself to how-to-cite.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3205 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 160430d4cc3e910870e8b727c8b54c930fa0363f
2018-02-01Merge from trunk.glisse
hand-merge README that moved to *.md. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3201 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f1922a265c79937e507bbb963875d21fae88069e
2018-01-25Code review : fix camel case for types and use of std::log instead of logvrouvrea
Add CGAL dependency for Nerve_GIC (link to bottleneck) Add persistence representation in bibtex git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3155 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8a45497b3d1f34a5c4a1c7856113c6b7680a12a2
2018-01-22Merge branch Nerve_GIC - using boost Dijkstra instead of Simplex treevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3147 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 82ab3eca5c907cbbb716a7ef47cc84b0a0d1000d
2018-01-16Some references for sparse Rips.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3138 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 56151faea78697afd3da72084f186d25b9252552
2018-01-03git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3110 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 95fd5b9e4cd4738ecdeaeb27f20d267816b7bead
2017-12-22cleaned the codemcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Nerve_GIC@3096 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0a24fb8ff0300dc06c48fdb163d053387ae21c29
2017-12-06git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3049 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2578f46d6953ceb7f1cc2fd4d959c8662e2936d1
2017-12-06Merge C++ version of persistence representationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration_bis@3043 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6421c7cbe670fad1a8900ccc0ea6ff32297dd5e7
2017-10-09git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Nerve_GIC@2771 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cd87a5b72b67d27b21f765fac822ea69f9496019
2017-05-30Merge gudhi_stat branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2470 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2067fcd13bd6d8549fccf63f1d03fd31bc783cc8
2017-04-19Fix doc issuevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2368 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: aa8997eb2c66b9b25206688acc5819f2ded0e985
2017-04-19Merge add_test_windows branch to fix add_testvrouvrea
Fix a biblio doxygen warning git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2365 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 72a9180aa6be56fca0b5f357247300df17770159
2017-04-07Answers to Marc's commentspdlotko
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/gudhi_stat@2317 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f941a6b20210282408d0ef95b84daa973add2513
2017-04-01Merge last trunk modifications and fix new rips interfacevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/gudhi_stat@2299 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1e836cba1a372f609e94b66b6db512817a3d875e
2017-03-08New revision of witness and its documentationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_cythonize@2181 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5f002c1a58b2daff6c6826a2552d1c101f6810e1
2017-03-03Labes in be bibliography changed to meangingfull ones. pdlotko
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/gudhi_stat@2157 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 03cac72a0b7967ac840dc141d9a1048c77147817
2017-03-03Merge last trunk modificatinosvrouvrea
make sphinx depends on cython target git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_cythonize@2155 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ebb1709872963ffd30a6d31ab596f2715ca14436
2017-03-03changes to the doc, towards building a doc...pdlotko
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/gudhi_stat@2145 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ced0884e23fdac7301bc379c8533bb3b2fc4ae53
2017-02-22Merged with trunk + minor changesskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/relaxed-witness@2094 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6b23778cbe43e7697cd325039e843758a263d927
2017-02-03Modification for GUDHI version 2.0.0vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_cythonize@2060 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4b91c810b51851f5ef98b09dd58ce0359003390d
2017-01-24Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_cythonize@1989 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0743b9beb802b839357ecce17e11af5d4ef2a163
2017-01-19Merged trunk to relaxed_witnessskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/relaxed-witness@1960 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9d13c3b96706c4656f2ab04dd554a2a681d6b1f8
2017-01-16Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1938 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8af39a00b9134dbcc77883412c29d7184479979b
2016-12-15Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1888 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 951a081ac634f829fa49265005ea1e620f2c08ca
2016-12-01Merge last trunk modificationsvrouvrea
add Py test for subsampling Add choose_n_furthest from off file git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_cythonize@1810 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a23746a3dd427edc958b375f9f0ac4b4d2901fcb
2016-11-21Add distance matrix rips construction (doc, code, test)vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1766 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6b9bdecbaf0aca12facb023e66bdea71e8e8cd38
2016-11-18Merged trunc in witnessskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/relaxed-witness@1761 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 67fd48a872fb297cd04ba127bb0778c5216f0a41
2016-11-17Modify Bibtex after reviewed by Siargeyvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1756 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 623867e42aa12d484929e415a06ed8cd3b5ba06c
2016-10-20Merge last trunk modificationvrouvrea
Fix doc issue Still doc issue git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_cythonize@1739 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0a99345f06e93a3525691699a6fe1505979e8e8e
2016-10-11Problem of merge with tangentialcomplex branch.vrouvrea
Redo in an integration branch git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tangential_integration@1701 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fa029e8e90b3e203ea675f02098ec6fe95596f9f
2016-10-07Added a big chunk of documentation. +small fixesskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/relaxed-witness@1679 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d3166034bf662121bc21583bb027c67f736e904c
2016-09-28Fix bottleneck doxygen issuesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_integration@1574 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d85f8399427bb2518650adaf5f9e849b53e13048
2016-08-12Fix some biblio issue with sphinxcontrib.bibtexvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_cythonize@1429 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: db1128c0f6e36846adba6b527b3055347a982d74
2016-08-09Modifications for sphinx documentationvrouvrea
latex support (still pseudo code issue) doctest support for linux Cmake launches make html && make doctest to test the doc git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_cythonize@1427 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 58de6ec78d4368b99c9a81c9c229c4e7b075835a
2016-05-11Create 2 new packages: Subsampling & Spatial_searchingcjamin
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2016-04-15Add bitmap and witness in gudhi bibtexvrouvrea
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2016-04-08Merge last trunk developmentvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1107 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a8fcecf0beb0517a1da01c57d2e1c2e32a2aba89
2016-01-12Fix alpha complex remarks and bugsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@957 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fa837fd1a4373c2322db16353d98767907f34c79
2015-12-11Commit code and doc reviewvrouvrea
Still issue and lot of logs in simplex_tree::prune_above_filtration git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@945 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cd4f60ddcacb0444e0eb3b9323d8042eb49b132e
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