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2017-10-02Fix weighted_alpha_complex_3d_persistence to work with CGAL 4.11 (2 cpp and ↵vrouvrea
cmake compiles the correct one) Homogeneize alpha_complex_3d* codes Fix weighted_periodic_alpha_complex_3d_persistence with CGAL doc help Add grid off file with weights to test weighted_periodic_alpha_complex_3d_persistence git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/weighted_alpha_complex_fix@2744 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ecc4f3629e75bd986ffd22ec348f0412163e4dbd
2017-05-18Modify the way cmake handles utilities, examples, test and benchmarks with ↵vrouvrea
new options to activate/desactivate them. Move hypergenerator as a common utility. Move random point generation from hypergenerator in src/common/include/gudhi/random_point_generators.h git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cmake_modules_for_gudhi@2442 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e2d13e4b0c09455fb604b684f6d71530352271eb
2017-05-15Add GPL copyright to the software used to generate the data.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/doxygen_using_mathjax@2427 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3aa8a0a8847b57db28ec26a38af72abf3bf509ad
2017-04-18Rename CMake testsvrouvrea
Add specific GUDHI test coverage function Rename cmake/modules/GUDHI_*.txt git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_test_windows@2362 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 071b1eda7d11b1781a9601a013b88a0b2a9b7bf7
2017-03-24Workaround for CGAL version 4.8 compilation issuevrouvrea
New target CGAL_WITH_EIGEN3_VERSION set with CGAL_VERSION when CGAL and Eigen3 found to ease CMakeLists.txt git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cgal_4.8_issue@2241 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2fbf1f9397aa1549ba05aa26ac6852b882dce147
2017-03-16Merge Last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_3d_fix@2192 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 737b10fe34bcc842a1e64522f1eb14c16c7cfec0
2017-03-08Add sphere points on the grid example and document itvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_3d_fix@2177 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f746ffbf946df64df9221304bbb3eb55e5db6b4f
2017-03-08Weighted alpha complex 3d featurevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_3d_fix@2176 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a5bb0995c4aa75783666adc174245d4639057b8a
2017-03-03Add copyrights on datasetvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/gudhi_doc_2.0.0@2139 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5453960e09145bcee3c6b73fd6c57e73b58c3142
2017-01-20Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_misc_fixes@1973 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e96278cb0c55788b6aa78fa4a52dae7197b09adb
2017-01-20cpplint fixesvrouvrea
doxygen warning fixes git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bottleneck_misc_fixes@1972 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5b2328016edb6b5b30de668a0488c576d3d92c40
2017-01-19Only OFF filesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/distance_matrix_in_rips_module@1961 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 884285c899de8de4495b8372305052137b8448f6
2016-12-02Indicate ambient dimcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1815 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a6fb388505a43878c7a31592f5ccc4b29fda12a6
2016-10-04witness_complex_from_file uses off files nowvrouvrea
Remove non-OFF files from repository git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/off_files_only@1613 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d663eec701576a64c4c4af03d61da334a055c3d4
2016-09-23Examples shall use only off filesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/off_files_only@1555 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 73833d163f3b76604a5111dc4374b635d60afade
2016-09-19Rename off file reader as stands in convention.vrouvrea
Add an example with a vector of double for point type. Fix SO3 OFF files accordingly to OFF file standard. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1510 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ff61bed1f1895bc5bf1af4ae946e2a84a692c390
2016-08-04Make GUDHI Cmake less verbose on CGAL package findingvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1415 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2eebce43b0f75ab1cef3a2fe6f2c1bd0b38672a9
2016-07-01Eigen3 find_package factorizationvrouvrea
CGAL find package in root CMakeLists.txt for Witness complex git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/eigen3_cmake_factorization@1377 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 32137f7687837c63ecfab3a2d11114b27873a1f2
2016-06-14data points generator to follow convention namingvrouvrea
Alpha_complex instead of Alpha_shape git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/fix_naming@1278 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 680d599dce4b87a570083ac16c6574166d7af47d
2016-06-10Missing link with Boost Systemcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1270 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 70e3dfb20af1a0b4f048f56fff0c85dbbde3f530
2016-06-08periodic_alpha_complex_3d_persistence modification for is_cuboid_3 to be ↵vrouvrea
customized through a file. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1261 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9862a35dcdfc0dbf0eff01375ea716f094833127
2016-05-24Add Aurélien Alvarez's generatorcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1189 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5fe81e09f9f5efe8ea50ac34d9c012c70283a3e6
2016-04-16off file shouldn't be executableglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1136 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e3b902f56f2bddcc363e6abd2b39533bf36c8a6d
2016-04-16Less CRLF line endings.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1135 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 83328005a983668b00961f069672e97493e42a34
2016-04-14Add of src/common/include/gudhi/Points_3D_off_io.h to read specific 3D OFF ↵vrouvrea
Files for CGAL Point_3 Add an example to read 3D OFF Files for CGAL Point_3 Modify alpha_complex_3d_persistence.cpp to read OFF files Add periodic_alpha_complex_3d_persistence.cpp in Persistent_cohomology examples Add info about new examples in README git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/periodic_alpha_complex_3d@1116 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6b423b598869a0f4f9c62d93c93b69efd93c0161
2016-02-19Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1032 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0e5b89e0ea0d69ebfdb74ba3bbf29518f7ce5ce8
2016-02-04CMake strategy modificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Win64_Boost_Xunit_fix@1003 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c917934525e020b54b2f4506b5c9d060a28c9d89
2016-01-12Backmerge of last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@959 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a5c6ef0ae2ee1e18fff88b98131ff4d14a252152
2016-01-08tbb branch merge. Link with Intel TBB for parallel programmation.vrouvrea
Reduce persistence UT timings. Add parallel_rips_persistence compilatino and test. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@954 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4623c6a0c31d2b9574e2bb33836261fc26a89555
2015-10-13Backmerge from trunkvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@853 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3f1b56bf4986df7bb2938ea2fff944eb9bf9b653
2015-10-12Workaround for include(${CGAL_USE_FILE}) in GudhUI and hypergeneratorvrouvrea
Fix make test issue when cmake in a build directory for SimplexTreeUT and skbl TestGeometricComplex git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@849 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d6b35ba4b697c7ee61fcd39b998a0fd717a3716a
2015-10-08cpplint fixes on GudhUIvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@844 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3acf1e789f3e4bded974f324ce3161bc1d1d2433
2015-10-02Doxygen to be made from user version. Hypergenerator fix. Add definitions ↵vrouvrea
for debug traces. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@821 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5625aaab792264df86d7d442a2e6ff9886cf5d24
2015-08-03backmerge of trunkvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@721 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1c30d5d84f1f401089f80c08ee1d584f28bf2274
2015-06-25Add Tore files generated from Steve Oudotvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@654 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1fd75edbb79cd4097299b0a0cac701626caddf8e
2015-06-23Alpha complex documentation - 2nd partvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@633 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 023b5aaa57593a4e8e77cf12f388559b638f0eb1
2015-06-18Backmerge of last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@625 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8729c94e37923be0bbf943513025e7362807f041
2015-06-18Moved alphashapedoc.off in data/pointsvrouvrea
Moved Delaunay triangulation OFF files read and write in src/common Delaunay triangulation OFF files read and write documentation, examples and tests git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@623 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e03902736a79436e97dbf77a88504f3faa8bd9c6
2015-06-16Alpha_complex renamed.vrouvrea
Compilation and tests are OK. bimap is stored in class. bimap is now on CGAL Vertex_iterator - instead of points. is_gabriel not computed when simplex dimension is 1. is_gabriel not computed when filt(Tau) is not NaN. Delaunay_triangulation is a pointer constructed in Delaunay_triangulation_off_io.h git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@617 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4fa4a26ce47066efe22aed99734ff1dd821ad70b
2015-04-11Images and headers should not be executable.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@563 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2c3caac0e8a0ddfc7365ed02997aaab9b4dc5c17
2015-03-19Add of Bottleneck functionnalityvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@493 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 18db594b00f5065caf703e0ef026c707c985be79
2015-03-18Add alpha shapes functionnalityvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@488 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ef821bf7026520540b5869e16c08c290d3ed9477
2015-03-02Add of hyper sphere and cube generator of OFF files.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@473 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 894167c2f2ab6e9f209b35adb8d362b09c6eeec5
2015-02-05add new data setssalinasd
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@453 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9e81fa56f4e3cc492a5aec3ec301c94bce7710ef
2014-12-17filename and content modificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@374 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a5758fdc943e875e0d12fea0a0cea6d6dd7549a4
2014-12-17Add bunny copyrightvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@371 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 81823145ebb5bafa96b6834fb21c232fa8788028
2014-12-10Add examples in testsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cpplint_test@347 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a53767f02ba413531d397ebf720d87ed9d832a79
2014-12-05Moved into trunkvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@341 636b058d-ea47-450e-bf9e-a15bfbe3eedb
generated by cgit v1.2.3 (git 2.39.1) at 2024-05-23 18:39:29 +0000