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path: root/src/Alpha_complex/doc/Intro_alpha_complex.h
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2022-05-23Documentation: Render formuals by means of MathJax 3albert-github
- create entries in Doxyfile.in for the use of MathJax - adjust formula so it is properly rendered in MathJax 3 (formula will also work with MathJax 2) (available in doxygen since doxygen 1.9.2)
2022-05-23[skip ci] example from a small moleculeVincent Rouvreau
2022-05-23[skip ci] example from a small moleculeVincent Rouvreau
Co-authored-by: Marc Glisse <marc.glisse@inria.fr>
2022-05-21Documentation: Non persistent linksalbert-github
During the link check we found some references to `#title..` in respect to links to CGAL, these links work at the moment but are, by CGAL, generated links during runtime based on the HTML `<H...>` tags. When a new paragraph or chapter is added these numbers will change and thus will the link point to the wrong place. All these items have also a more persistent reference anchor that is generated based on the `<name>` of the section (e.g. `\section <name> <description>`). Therefore it is better to used the references based on the `<name>`.
2021-09-13make_filtration_non_decreasing no more called in alpha complex dD exact ↵VincentRouvreau
version and exact and safe 3d versions
2021-04-27Doxygen documentation improvementROUVREAU Vincent
2020-10-05doc review: Add some precision about regular triangulationsROUVREAU Vincent
2020-10-05doc review: eigen 3.3.5 and cgal 5.2.0 is advised for perf reasons not only ↵ROUVREAU Vincent
on weighted version
2020-09-29doc review: fix eigen version and periodROUVREAU Vincent
2020-09-16Add weighted in tocROUVREAU Vincent
2020-09-16Some documentation about weighted dD Alpha complex. Make examples 3d/dD ↵ROUVREAU Vincent
consistents
2020-01-27Merge upstream and resolve conflictROUVREAU Vincent
2020-01-10Fix #105: Add alpha value on the picture, clarify simplices removal from the ↵ROUVREAU Vincent
Delaunay complex, use max_alpha_square=32 in the Python example
2019-12-04Delaunay triangulation for alpha complex in dDROUVREAU Vincent
2019-11-26Fix doxygen warnings about new cgal bibtex entriesROUVREAU Vincent
2019-11-16Doc review: Add the starting point of the documentationROUVREAU Vincent
2019-11-06Add doc warningsROUVREAU Vincent
2019-08-14Fix #35 Modify Copyright as GUDHI is not only a C++ libraryROUVREAU Vincent
2019-06-13Change CopyrightROUVREAU Vincent
2018-11-19Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@4003 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 94bbb0a5588ceee1ecf73d0503892e2f6c78274f
2018-11-17Repeated "if" in the doc.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/AC-glisse@3998 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 39df24b52cd76333ffcdadfb7d9102ff8c29c3c8
2018-11-16Doc review : User version bad description for Alpha complex 3dvrouvrea
Add a comment for alpha complex 3d example creation for templates Code review : SAFE is now the default version git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@3990 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a283cc630ac78634d6700aefb981d130c9464024
2018-09-25clang-format all filesvrouvrea
Add safe version alpha complex 3d persistence utility git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@3907 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 54b2d0de9231511864df9fa637b60b7ccf34f50f
2018-07-31Add unitary tests and documentationvrouvrea
Fix debug exception mechanism git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@3712 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 43f66f3843981ab9cd74c117c2b1c6bb9b94810b
2018-06-07Fix alpha complex user pseudo code on documentationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3565 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4b4300ef95fac962dd2c4d6a44c5c9f80ca6bc4a
2018-04-27Merge Copyright clarificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3402 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c24c2226a76df7a6a95d2531e98850c7c19580e1
2018-04-26Fix Copyrightsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/copyright_clarification_vincent@3400 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ff348beedf92656c6913c2a1df983b5804b33988
2018-04-10Doc review : Add explanation when to use Alpha or Cech.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3369 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4b6cf58478a7dbe1825491681507d4304d8f3584
2018-01-26Move documentation Copyright in footervrouvrea
Removed from each module git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3167 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7595f2d18cdc3773bbd96fa9fed414876ff9fdc7
2017-05-15Use MATHJAX for doxygen documentation generation.vrouvrea
Fix pseudo code for alpha complex git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/doxygen_using_mathjax@2428 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 05ce587c4ba46e164dad02766cbaca40373e3ad8
2017-04-19Rename tests and examples to be consistent with the naming rulesvrouvrea
xml test results is now generated out of source git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_test_windows@2364 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ae2dd1592b63f4e7da5e17655761697b6daf7dd0
2016-09-23Modify the Alpha complex doc wit a concept to create a simplicial complex ↵vrouvrea
from alpha complex git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_create_complex@1546 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d8083c3b0e03e1cf0033e5c7c1ba6f95618efdc1
2016-09-22New template function create_complex for Alpha_complex to create the ↵vrouvrea
simplicial complex git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_create_complex@1540 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 24e53dc58d158166b976dd09760ad0e2acaf8e36
2016-06-10Rename namespaces according to conventioncjamin
+ Missing Boost_THREAD_LIBRARY + Useless typename + Use TBB_LIBRARIES git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/fix_naming@1274 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5c02ec481b62ef52b40d849e76e3d333e2ca4e7c
2016-04-08Merge of alpha complex feature from trunkvrouvrea
Add Eigen3 in installation Add alpha complex in introduction All examples directory moved to example (was example/common, example/Alpha_complex) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Doxygen_for_GUDHI_1.3.0@1110 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0b88a4f2b102e2189f4b916b8358ffb2458a72f0
2016-04-06Replace Delaunay_triangulation_off_io.h and ↵vrouvrea
Delaunay_triangulation_off_rw.cpp with Points_off_io.h and CGAL_points_off_reader.cpp Adapt UT and examples for this Adapt Alpha complex for it Alpha complex is now inserting points in a faster way (after a spatial_sort). Remove Alpha complex construction from a pointer on Delaunay triangulation (no more needed). Adapt documentation to all these modifications Forbid copy/move constructor/assignment operator on Alpha complex git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1098 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 08a673b66451b5cb03fbdf482d696d93b35d220f
2016-03-17Fix cpplint/cppcheckvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1052 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d598999dec360fb4a80ca3e228128d889bfed3c7
2016-03-16CppCheck and CppLint fixes for alpha complexesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1047 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a9b42ad2f8751384b5227fa3da8f380cda9b3696
2016-03-15In Delaunay_triangulation_off_io.h, constructing the Triangulation from a ↵vrouvrea
vector of Points is a more efficient way (instead of inserting points on the fly). As consequence, the documentation needs to be rewritten as the points index are changed. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1046 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: bdb0196b61418a983cfaf7f6781a3a2906e8b136
2016-02-20Details in the doc of alpha-complex.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1033 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7cc1b51ef8e93ee987710a8ea2ed4ac98638f099
2016-02-03Mentionning Delaunay complex in Alpha complex documentation (user and reference)vrouvrea
Specifying Alpha complex Kernel must be an Epick_d dD kernel (user and reference) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@998 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b1a7a0cadd236bbfa6c529f2979ad2096414e207
2016-02-02alpha off reader test strategy modificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@995 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: aa4ba97eecefb03e01a53ae1e2b50248a0857043
2015-12-11Commit code and doc reviewvrouvrea
Still issue and lot of logs in simplex_tree::prune_above_filtration git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@945 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cd4f60ddcacb0444e0eb3b9323d8042eb49b132e
2015-11-27After doc reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@931 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 578da0e6fff453560e666e8f00147f9e10cb6de6
2015-11-12code review fixvrouvrea
prune_above_filtration and remove_maximal_simplex in Simplex_tree.h make_filtration_non_decreasing and rec_make_filtration_non_decreasing in Simplex_tree.h git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@910 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a20c9da65a5a3294e42ad2dd45a399d77fb5ad30
2015-10-02Review fixvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@816 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d112bf6b1b07a75947392576baa53321326e65c4
2015-09-01Documentation fix (starts at 0 and not 1 + alpha shape was not correct)vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@765 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 99f8d4cd274778f5d7aac04afa84b780dc3678ec
2015-06-23Separate main alpha documentation from class documentationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@635 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c1a775a032fc5e5ee6da473b91d07cfc3f1930c6
generated by cgit v1.2.3 (git 2.39.1) at 2024-05-11 19:23:50 +0000