summaryrefslogtreecommitdiff
path: root/src/Alpha_complex/test
AgeCommit message (Collapse)Author
2019-08-14Fix #35 Modify Copyright as GUDHI is not only a C++ libraryROUVREAU Vincent
2019-06-14Remove gudhi_patches for CGAL and CGAL 4.11.0 is now the minimal CGAL ↵ROUVREAU Vincent
version required. Modification of documentation accordingly
2019-06-13Change CopyrightROUVREAU Vincent
2019-06-11try to fix Alpha_complex_test_unit on windowsROUVREAU Vincent
2018-11-23 // We could use Epick + CGAL::Tag_true for not weighted nor periodic, but ↵vrouvrea
during benchmark, we found a bug // https://github.com/CGAL/cgal/issues/3460 // This is the reason we only use Epick + CGAL::Tag_false, or Epeck // // FAST SAFE EXACT // Epick + CGAL::Tag_false Epeck Epeck git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@4012 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 88e844333b5bae8fcfd1104e493cdada1e4a4a3b
2018-11-21Separate tests to parallelize compilationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@4010 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 33bd17816b7258d16e20943e2f54b5379d174b84
2018-11-21Code review : Use # error instead of static_assert(false, ...) for CGAL ↵vrouvrea
version detection Doc review : Better document CGAL types (FT, Weighted_point_3, Point_3, ...) Weighted alpha complex 3d example simplification git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@4009 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 187d7a08468c96192b3cb82c93a2df5b425290f9
2018-11-19Fix compilation issue in debug modevrouvrea
to_double(*it) is also available if *it is a double Bad comment in Value_from_iterator between Epeck and Epick git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@4005 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cba42be09eeee39a12a6f0adf8ff72f9147f5d1a
2018-10-17Alpha complex 3d test was not checking CGAL is 4.11vrouvrea
Rewrite CMakeLists.txt to detect CGAL 4.11 for Alpha complex 3d git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@3962 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7ccddf06201760ef4fddc4432a3b208b8b0213f7
2018-09-25clang-format all filesvrouvrea
Add safe version alpha complex 3d persistence utility git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@3907 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 54b2d0de9231511864df9fa637b60b7ccf34f50f
2018-09-25Constants shall be upper casevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@3906 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fcafbe39665a69c6645f8b9d73fc67b98709540e
2018-09-25Fix unitary testsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@3902 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c14d5a04ef4abc2367d3a1707a1fcfafb07a9598
2018-09-17Add benchmarkvrouvrea
Safe version for Alpha complex 3d (missing part if not weighted and not periodic) Need to fix Alpha_complex_3d_unit_test git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@3893 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 304c9f89826008eab67a72f3742caa8d6d80f36b
2018-09-11Code review : rephrase a commentvrouvrea
Make tests successfull. Still need to investigate why it fails git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@3882 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5649bbe00e6aa39d6f8e7f494d0c3071883bf500
2018-09-07Code review : rearrange documentation and examples according to making ↵vrouvrea
choices more orthogonal Rename Alpha_complex_3d_options.h Alpha_complex_options.h as it can be used by Alpha complex dD git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@3875 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6c5b105248e4766a44438a187bb130a3722b310f
2018-08-31Fix weighted periodic compilation issuevrouvrea
Test is commented, to be investigated. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@3865 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e334d3f27e648cfc23f2d46fb2e2199a4b1922ff
2018-08-29weighted/non-weighted and periodic/non-periodic with fast/exact are working ↵vrouvrea
well (test suites and examples) Still utilities to rewrite Modify GUDHI_TEST_FLOAT_EQUALITY_CHECK as one test was reaching exactly std::numeric_limits<FloatingType>::epsilon() git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@3842 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: bbd17f90644b4b8444d480ca95da0909e8fe5048
2018-07-31Add unitary tests and documentationvrouvrea
Fix debug exception mechanism git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_3d_module_vincent@3712 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 43f66f3843981ab9cd74c117c2b1c6bb9b94810b
2018-05-15CMake minimal version is now 3.1vrouvrea
Compilation flags are now externalized in cmake/modules Add NO_POLICY_SCOPE for GUDHI_third_parties to fix warnings Try to fix CGAL 4.12 that is no more setting CGAL_LIBRARIES git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cmake_v3_vincent@3445 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0ac7613f016e28cc634606f76e85ecaf5bacb2d4
2018-04-26Fix Copyrightsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/copyright_clarification_vincent@3400 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ff348beedf92656c6913c2a1df983b5804b33988
2017-12-19Add a function for unitary tests to test floating point values equality w/wo ↵vrouvrea
epsilon values git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration_cmake_improvement@3083 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 835037fd6efea4fbfc9a494df3015186232388bf
2017-10-26Code review: downgrade_dimension renamed lower_upper_bound_dimension and ↵vrouvrea
make it private. Automatically when dimension_to_be_lowered_ is set (on removal) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_automatic_dimension_set@2810 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c764433bcc5357acc6454683d4f4182c7c960d6d
2017-09-22Remove automatic_dimension_set call from remove and prune functionsvrouvrea
Make it public to be available Modify tests accordingly git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_automatic_dimension_set@2703 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2ff42d5327ae76b121390a913c4e548d6f59ea99
2017-09-20Merge modifications for simplex_tree automatic dimension setvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_automatic_dimension_set@2689 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c18c6316d51f476a795b59c8b870db1aaf0b4591
2017-06-02Get rid of Boost_system library linkvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/boost_system_no_deprecated_test@2509 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 52deba0f2212767b99b801810d356e55417225db
2017-04-19Rename tests and examples to be consistent with the naming rulesvrouvrea
xml test results is now generated out of source git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_test_windows@2364 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ae2dd1592b63f4e7da5e17655761697b6daf7dd0
2017-04-18Rename CMake testsvrouvrea
Add specific GUDHI test coverage function Rename cmake/modules/GUDHI_*.txt git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_test_windows@2362 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 071b1eda7d11b1781a9601a013b88a0b2a9b7bf7
2017-03-24Workaround for CGAL version 4.8 compilation issuevrouvrea
New target CGAL_WITH_EIGEN3_VERSION set with CGAL_VERSION when CGAL and Eigen3 found to ease CMakeLists.txt git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cgal_4.8_issue@2241 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2fbf1f9397aa1549ba05aa26ac6852b882dce147
2016-10-14Fix Alpha complex UT for limit casevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1727 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2c5c93e0a4d78fc2441de966aebac72ba9419da8
2016-10-13This test fails on Win 32 and 64vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1726 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3f5820af954fb6185d938b3e67bc533954b41f7f
2016-10-12Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_create_complex@1715 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 68b171b536522a45c4304e40bafe11d08c8921dd
2016-10-12Using a pointer as a property map is deprecated in boost. Fixes the reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_create_complex@1714 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 09c2eb41ce80813afb950e5712e5aefa5c6bfd34
2016-10-11CMake message modificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1705 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cc129ae74df9da178e781bc05fe612cc34a282ed
2016-10-05Fix review commentsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_create_complex@1648 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: de0b4f12b6eb814224df13c5cec1069310115efa
2016-09-22New template function create_complex for Alpha_complex to create the ↵vrouvrea
simplicial complex git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_create_complex@1540 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 24e53dc58d158166b976dd09760ad0e2acaf8e36
2016-07-01Eigen3 find_package factorizationvrouvrea
CGAL find package in root CMakeLists.txt for Witness complex git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/eigen3_cmake_factorization@1377 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 32137f7687837c63ecfab3a2d11114b27873a1f2
2016-06-14data points generator to follow convention namingvrouvrea
Alpha_complex instead of Alpha_shape git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/fix_naming@1278 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 680d599dce4b87a570083ac16c6574166d7af47d
2016-06-10Rename namespaces according to conventioncjamin
+ Missing Boost_THREAD_LIBRARY + Useless typename + Use TBB_LIBRARIES git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/fix_naming@1274 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5c02ec481b62ef52b40d849e76e3d333e2ca4e7c
2016-06-10Use TBB_LIBRARIES instead of TBB_RELEASE_LIBRARY + missing boost dependencycjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1269 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d39ecf562678c53f960467e7cb14eeaff4b938c4
2016-06-07Rename projects in CMakeLists.txtcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/fix_naming@1257 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a51e43d795b0c246d0949c7566aa57d3e15925c7
2016-04-08Merge of alpha complex feature from trunkvrouvrea
Add Eigen3 in installation Add alpha complex in introduction All examples directory moved to example (was example/common, example/Alpha_complex) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Doxygen_for_GUDHI_1.3.0@1110 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0b88a4f2b102e2189f4b916b8358ffb2458a72f0
2016-04-06Replace Delaunay_triangulation_off_io.h and ↵vrouvrea
Delaunay_triangulation_off_rw.cpp with Points_off_io.h and CGAL_points_off_reader.cpp Adapt UT and examples for this Adapt Alpha complex for it Alpha complex is now inserting points in a faster way (after a spatial_sort). Remove Alpha complex construction from a pointer on Delaunay triangulation (no more needed). Adapt documentation to all these modifications Forbid copy/move constructor/assignment operator on Alpha complex git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1098 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 08a673b66451b5cb03fbdf482d696d93b35d220f
2016-03-23prune_above_filtration returns filtration vector modification information ↵vrouvrea
instead of calling initialize_filtration() git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1071 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6fdc1797ac6e7b452abe150643f0ec9578c3bbab
2016-02-19Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1032 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0e5b89e0ea0d69ebfdb74ba3bbf29518f7ce5ce8
2016-02-02alpha off reader test strategy modificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@995 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: aa4ba97eecefb03e01a53ae1e2b50248a0857043
2016-01-12Fix alpha complex remarks and bugsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@957 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fa837fd1a4373c2322db16353d98767907f34c79
2015-12-11Commit code and doc reviewvrouvrea
Still issue and lot of logs in simplex_tree::prune_above_filtration git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@945 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cd4f60ddcacb0444e0eb3b9323d8042eb49b132e
2015-11-13Utils.h -> Debug_utils.hvrouvrea
More verbose in debug mode (use NDEBUG instead of DEBUG_TRACES) GUDHI_CHECK function to throw in debug or ignore in release mode git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@911 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 250dc0c0f5146f0b9e3fce0e9a8ca0da6af7cf98
2015-11-12code review fixvrouvrea
prune_above_filtration and remove_maximal_simplex in Simplex_tree.h make_filtration_non_decreasing and rec_make_filtration_non_decreasing in Simplex_tree.h git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@910 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a20c9da65a5a3294e42ad2dd45a399d77fb5ad30
2015-11-09Code review fixesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@895 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: aa5f6a30b847dd8a2add83fab50762338095de26
generated by cgit v1.2.3 (git 2.39.1) at 2024-05-23 23:12:29 +0000