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2023-01-20Merge tag 'tags/gudhi-release-3.7.1' into dfsg/latestdfsg/latestGard Spreemann
2023-01-05Merge pull request #782 from mglisse/sklearn-getparamsVincent Rouvreau
Fix get_params for vector_methods
2023-01-04Merge pull request #740 from mglisse/insert2Vincent Rouvreau
Advertise the new SimplexTree functions in the Rips user manual
2023-01-03fix get_paramsMarc Glisse
2022-12-17Advertise edge collapses more.Marc Glisse
2022-12-17Make the order of atol centers a bit more reproducible.Marc Glisse
2022-12-17Fix Atol doctestMarc Glisse
the skip marks were on the wrong lines, which resulted in WARNING: ignoring invalid doctest code Reminder: testoutput was disabled because it was too random (the lines are swapped if I run it right now).
2022-12-15Merge pull request #719 from mglisse/endpointsVincent Rouvreau
More consistent choice of a grid for diagram representations
2022-11-30Merge pull request #754 from mglisse/insert-vertices-firstVincent Rouvreau
Insert vertices first
2022-11-25Merge pull request #737 from mglisse/cover-heraVincent Rouvreau
Fall back to Hera's bottleneck in Nerve_GIC
2022-11-25Remove redundant includeMarc Glisse
2022-11-22Merge pull request #753 from VincentRouvreau/fix/cmake_numpy_dependencyVincent Rouvreau
Python module should not be compiled if numpy is not found
2022-11-22Merge pull request #745 from mglisse/pytest-warns-noneVincent Rouvreau
pytest.warns(None) deprecated
2022-11-21Always include Hera's directoryMarc Glisse
2022-11-21Fall back to Hera's bottleneck without CGALMarc Glisse
Once we move to Hera 2, we could just add it to include_directories and not bother adding it specifically for 3 python files + some tests and examples. [skip ci]
2022-11-21Insert vertices firstMarc Glisse
2022-11-21Merge pull request #751 from mglisse/virtualVincent Rouvreau
Handle clang warnings
2022-11-21Python module should not be compiled if numpy is not foundVincent Rouvreau
2022-11-21Merge pull request #744 from mglisse/distancemetricVincent Rouvreau
sklearn's DistanceMetric has moved
2022-11-21Merge pull request #746 from mglisse/warnwassVincent Rouvreau
Catch warnings in wasserstein test
2022-11-21Handle clang warningsMarc Glisse
The other virtual functions already had override. `#if` ended up presenting the compiler with preprocessed code that admittedly looked suspicious, although it is obviously fine if you look at the original source. Still, the brackets don't hurt much.
2022-11-21Merge pull request #735 from mglisse/hera2Vincent Rouvreau
Update to Hera 2
2022-11-18Merge pull request #741 from mglisse/maxdimMarc Glisse
Rename argument of expansion
2022-11-18Catch warnings in wasserstein testMarc Glisse
2022-11-18pytest.warns(None) deprecatedMarc Glisse
The warnings points to https://docs.pytest.org/en/latest/how-to/capture-warnings.html#additional-use-cases-of-warnings-in-tests
2022-11-18sklearn's DistanceMetric has movedMarc Glisse
2022-11-18Merge pull request #700 from VincentRouvreau/cite_gudhi_biblioVincent Rouvreau
Proposal for how_to_cite_gudhi update
2022-11-17Rename argument of expansionMarc Glisse
2022-11-17Advertise new SimplexTree functions in Rips user manualMarc Glisse
2022-11-16Merge branch 'master' into endpointsMarc Glisse
2022-11-16Merge remote-tracking branch 'refs/remotes/mine/insert' into insertMarc Glisse
2022-11-16Clarify doc.Marc Glisse
2022-11-16Merge branch 'master' into insertMarc Glisse
2022-11-16Use float for max_filtration in testMarc Glisse
Co-authored-by: Vincent Rouvreau <10407034+VincentRouvreau@users.noreply.github.com>
2022-11-15Also provide ssize_t for wassersteinMarc Glisse
I think I'll merge the 2 files later.
2022-11-15Update to Hera 2Marc Glisse
2022-11-14Fix doc of attributesMarc Glisse
2022-11-14Avoid the word "guess"Marc Glisse
2022-11-14Document grid_Marc Glisse
2022-11-14Update python representations module contributorsVincent Rouvreau
2022-11-14endpoints for Entropy, idempotent fit(), refactor grid_Marc Glisse
2022-11-14Merge pull request #725 from mglisse/rips_pointsVincent Rouvreau
Make RipsComplex construction less confusing
2022-11-11blackMarc Glisse
2022-11-11Special case for writing 3d OFFMarc Glisse
2022-11-11Link to OFF formatMarc Glisse
2022-11-09New write_points_to_off_fileMarc Glisse
2022-11-08Reject positional arguments in RipsComplex.__init__Marc Glisse
2022-11-08Clarify doc of RipsComplex.__init__Marc Glisse
2022-11-04Use fetch_spiral_2d in the docMarc Glisse
2022-11-04Merge pull request #717 from mglisse/scipy19Vincent Rouvreau
Translate n_jobs to workers for SciPy