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2020-12-19Docstring improvements in RipsComplexUmberto Lupo
- create_simplex_tree method referred to the Delaunay triangulation instead of the flag complex - "rips" was not capitalized - "double" was used in the docs but only "float" (which has double precision) is a Python type
2020-12-14Fix sphinx error on Azure and AppveyorROUVREAU Vincent
2020-12-14Fix sphinx warning and doc identationROUVREAU Vincent
2020-12-12Merge pull request #436 from VincentRouvreau/ci_without_cgalVincent Rouvreau
Add build and tests wo cgal and eigen and wo cgal
2020-12-11code review: else branchROUVREAU Vincent
2020-12-11code review: throw an eception if collapse_edges when no Eigen3ROUVREAU Vincent
2020-12-11code review: GUDHI_USE_EIGEN3 generated by CMake in __init__.py as suggested ↵ROUVREAU Vincent
and roll back the other solution
2020-12-10Merge pull request #409 from mglisse/fardistMarc Glisse
Pass a distance function instead of a kernel to choose_n_farthest_points
2020-12-10Merge pull request #408 from mglisse/subsampleMarc Glisse
Clean-ups in subsampling
2020-12-10Fix memory leakROUVREAU Vincent
2020-12-09Fix #388ROUVREAU Vincent
2020-12-08Fix #388 for the tests to passROUVREAU Vincent
2020-12-08do not launch test_representation when no potROUVREAU Vincent
2020-12-08rollback test_representation and a CGAL condition to launch itROUVREAU Vincent
2020-12-08Make representations tests work if CGAL and/or POT is not thereROUVREAU Vincent
2020-11-18merge master and resolve conflictsROUVREAU Vincent
2020-11-13Merge pull request #405 from mglisse/botnegMarc Glisse
Bottleneck distance for one point or negative coordinates
2020-11-13Test with negative coordinatesMarc Glisse
2020-11-10Revert change to the exampleMarc Glisse
It would require updating the figure.
2020-11-09Don't test the equality case in sparsify_point_set. sqrt.Marc Glisse
2020-11-09Merge remote-tracking branch 'origin/master' into fardistMarc Glisse
and remove example installation
2020-11-08Test BettiCurve with infinite valueMarc Glisse
+ black reformatting
2020-11-07Swap clip with int conversionMarc Glisse
This allows correct handling of infinite values.
2020-11-05More numpy in BettiCurveMarc Glisse
suggested by @raphaeltinarrage
2020-11-04import matplotlib only when necessary in examples, in function of args. ↵ROUVREAU Vincent
Tests are without matplotlib, so no need to test if present
2020-11-03Add comment in code for get_boundaries if not interested in filtration valuesROUVREAU Vincent
2020-11-02Merge master and resolve conflictsROUVREAU Vincent
2020-10-31s/kernel/distance/ for choose_n_farthest_points argumentMarc Glisse
2020-10-22Document the changeMarc Glisse
It would be possible to emit the duplicate points instead of stopping, but the current implementation makes that inconvenient.
2020-10-17Handle diagrams with a single pointMarc Glisse
2020-10-17Don't put a (useless) point on the diagonal in the exampleMarc Glisse
2020-10-16Merge pull request #396 from VincentRouvreau/tensorflow_wasserstein_testVincent Rouvreau
Added tests for wasserstein distance with tensorflow
2020-10-05code review: move test_wasserstein_distance_grad from ↵ROUVREAU Vincent
test_wasserstein_distance.py to test_wasserstein_with_tensors.py
2020-10-05Merge pull request #363 from VincentRouvreau/stree_reset_filtrationVincent Rouvreau
A proposal for simplex_tree reset_filtration (python & C++)
2020-09-29Added tests for wasserstein distance with tensorflowROUVREAU Vincent
2020-09-28doc review: improve reset_filtration documentationROUVREAU Vincent
2020-09-28code review: Let the exception propagateROUVREAU Vincent
2020-09-08CMake > 3.5 to use Boost targets. Compile only what is available from boost ↵ROUVREAU Vincent
targets
2020-08-25Merge pull request #382 from yuichi-ike/weighted_ripsVincent Rouvreau
Documents for weighted Rips
2020-08-25Code review: min_dim = 0 as default and some doc reviewROUVREAU Vincent
2020-08-24code review: call boundary_simplex_range only onceROUVREAU Vincent
2020-08-21Add link to cubical notebookROUVREAU Vincent
2020-08-21Add barycenter notebook linkROUVREAU Vincent
2020-08-21Add link to extended persistence notebookROUVREAU Vincent
2020-08-21Move examples and link to notebookROUVREAU Vincent
2020-08-21Add -DCMAKE_BUILD_TYPE=Release on installation docROUVREAU Vincent
2020-08-19docs modifiedyuichi-ike
2020-08-18reset_filtration from a dimension (instead of 'until')ROUVREAU Vincent
2020-08-18Merge master and resolve conflictsROUVREAU Vincent
2020-08-18Merge master & resolve conflictsROUVREAU Vincent
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