import gudhi """This file is part of the Gudhi Library. The Gudhi library (Geometric Understanding in Higher Dimensions) is a generic C++ library for computational topology. Author(s): Vincent Rouvreau Copyright (C) 2016 Inria This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program. If not, see . """ __author__ = "Vincent Rouvreau" __copyright__ = "Copyright (C) 2016 Inria" __license__ = "GPL v3" def test_write_off_file_for_tests(): file = open("subsample.off", "w") file.write("nOFF\n") file.write("2 7 0 0\n") file.write("1.0 1.0\n") file.write("7.0 0.0\n") file.write("4.0 6.0\n") file.write("9.0 6.0\n") file.write("0.0 14.0\n") file.write("2.0 19.0\n") file.write("9.0 17.0\n") file.close() def test_simple_choose_n_farthest_points_with_a_starting_point(): point_set = [[0,1], [0,0], [1,0], [1,1]] i = 0 for point in point_set: # The iteration starts with the given starting point sub_set = gudhi.choose_n_farthest_points(points = point_set, nb_points = 1, starting_point = i) assert sub_set[0] == point_set[i] i = i + 1 # The iteration finds then the farthest sub_set = gudhi.choose_n_farthest_points(points = point_set, nb_points = 2, starting_point = 1) assert sub_set[1] == point_set[3] sub_set = gudhi.choose_n_farthest_points(points = point_set, nb_points = 2, starting_point = 3) assert sub_set[1] == point_set[1] sub_set = gudhi.choose_n_farthest_points(points = point_set, nb_points = 2, starting_point = 0) assert sub_set[1] == point_set[2] sub_set = gudhi.choose_n_farthest_points(points = point_set, nb_points = 2, starting_point = 2) assert sub_set[1] == point_set[0] # Test the limits assert gudhi.choose_n_farthest_points(points = [], nb_points = 0, starting_point = 0) == [] assert gudhi.choose_n_farthest_points(points = [], nb_points = 1, starting_point = 0) == [] assert gudhi.choose_n_farthest_points(points = [], nb_points = 0, starting_point = 1) == [] assert gudhi.choose_n_farthest_points(points = [], nb_points = 1, starting_point = 1) == [] # From off file test for i in range (0, 7): assert len(gudhi.choose_n_farthest_points(off_file = 'subsample.off', nb_points = i, starting_point = i)) == i def test_simple_choose_n_farthest_points_randomed(): point_set = [[0,1], [0,0], [1,0], [1,1]] # Test the limits assert gudhi.choose_n_farthest_points(points = [], nb_points = 0) == [] assert gudhi.choose_n_farthest_points(points = [], nb_points = 1) == [] assert gudhi.choose_n_farthest_points(points = point_set, nb_points = 0) == [] # Go furter than point set on purpose for iter in range(1,10): sub_set = gudhi.choose_n_farthest_points(points = point_set, nb_points = iter) for sub in sub_set: found = False for point in point_set: if point == sub: found = True # Check each sub set point is existing in the point set assert found == True # From off file test for i in range (0, 7): assert len(gudhi.choose_n_farthest_points(off_file = 'subsample.off', nb_points = i)) == i def test_simple_pick_n_random_points(): point_set = [[0,1], [0,0], [1,0], [1,1]] # Test the limits assert gudhi.pick_n_random_points(points = [], nb_points = 0) == [] assert gudhi.pick_n_random_points(points = [], nb_points = 1) == [] assert gudhi.pick_n_random_points(points = point_set, nb_points = 0) == [] # Go furter than point set on purpose for iter in range(1,10): sub_set = gudhi.pick_n_random_points(points = point_set, nb_points = iter) print(5) for sub in sub_set: found = False for point in point_set: if point == sub: found = True # Check each sub set point is existing in the point set assert found == True # From off file test for i in range (0, 7): assert len(gudhi.pick_n_random_points(off_file = 'subsample.off', nb_points = i)) == i def test_simple_sparsify_points(): point_set = [[0,1], [0,0], [1,0], [1,1]] # Test the limits # assert gudhi.sparsify_point_set(points = [], min_squared_dist = 0.0) == [] # assert gudhi.sparsify_point_set(points = [], min_squared_dist = 10.0) == [] assert gudhi.sparsify_point_set(points = point_set, min_squared_dist = 0.0) == point_set assert gudhi.sparsify_point_set(points = point_set, min_squared_dist = 1.0) == point_set assert gudhi.sparsify_point_set(points = point_set, min_squared_dist = 2.0) == [[0,1], [1,0]] assert gudhi.sparsify_point_set(points = point_set, min_squared_dist = 2.01) == [[0,1]] assert len(gudhi.sparsify_point_set(off_file = 'subsample.off', min_squared_dist = 0.0)) == 7 assert len(gudhi.sparsify_point_set(off_file = 'subsample.off', min_squared_dist = 30.0)) == 5 assert len(gudhi.sparsify_point_set(off_file = 'subsample.off', min_squared_dist = 40.0)) == 4 assert len(gudhi.sparsify_point_set(off_file = 'subsample.off', min_squared_dist = 90.0)) == 3 assert len(gudhi.sparsify_point_set(off_file = 'subsample.off', min_squared_dist = 100.0)) == 2 assert len(gudhi.sparsify_point_set(off_file = 'subsample.off', min_squared_dist = 325.0)) == 2 assert len(gudhi.sparsify_point_set(off_file = 'subsample.off', min_squared_dist = 325.01)) == 1