/* This file is part of the Gudhi Library - https://gudhi.inria.fr/ - which is released under MIT. * See file LICENSE or go to https://gudhi.inria.fr/licensing/ for full license details. * Author(s): Vincent Rouvreau * * Copyright (C) 2020 Inria * * Modification(s): * - YYYY/MM Author: Description of the modification */ #define BOOST_TEST_DYN_LINK #define BOOST_TEST_MODULE "weighted_alpha_complex" #include #include #include #include #include #include #include // for std::fabs #include #include #include BOOST_AUTO_TEST_CASE(Weighted_alpha_complex_3d_comparison) { // check that for random weighted 3d points in safe mode the 3D and dD codes give the same result with some tolerance // Random points construction using Kernel_dD = CGAL::Epeck_d< CGAL::Dimension_tag<3> >; using Bare_point_d = typename Kernel_dD::Point_d; using Weighted_point_d = typename Kernel_dD::Weighted_point_d; std::vector w_points_d; using Exact_weighted_alpha_complex_3d = Gudhi::alpha_complex::Alpha_complex_3d; using Bare_point_3 = typename Exact_weighted_alpha_complex_3d::Bare_point_3; using Weighted_point_3 = typename Exact_weighted_alpha_complex_3d::Weighted_point_3; std::vector w_points_3; std::uniform_real_distribution rd_pts(-10., 10.); std::uniform_real_distribution rd_wghts(-0.5, 0.5); std::random_device rand_dev; std::mt19937 rand_engine(rand_dev()); for (int idx = 0; idx < 20; idx++) { std::vector point {rd_pts(rand_engine), rd_pts(rand_engine), rd_pts(rand_engine)}; double weight = rd_wghts(rand_engine); w_points_d.emplace_back(Bare_point_d(point.begin(), point.end()), weight); w_points_3.emplace_back(Bare_point_3(point[0], point[1], point[2]), weight); } // Structures necessary for comparison using Points = std::vector>; using Points_and_filtrations = std::map; Points_and_filtrations pts_fltr_dD; Points_and_filtrations pts_fltr_3d; // Weighted alpha complex for dD version Gudhi::alpha_complex::Alpha_complex alpha_complex_dD_from_weighted_points(w_points_d); Gudhi::Simplex_tree<> w_simplex_d; BOOST_CHECK(alpha_complex_dD_from_weighted_points.create_complex(w_simplex_d)); std::clog << "Iterator on weighted alpha complex dD simplices in the filtration order, with [filtration value]:" << std::endl; for (auto f_simplex : w_simplex_d.filtration_simplex_range()) { Points points; for (auto vertex : w_simplex_d.simplex_vertex_range(f_simplex)) { CGAL::NT_converter cgal_converter; Bare_point_d pt = alpha_complex_dD_from_weighted_points.get_point(vertex).point(); points.push_back({cgal_converter(pt[0]), cgal_converter(pt[1]), cgal_converter(pt[2])}); } std::clog << " ( "; std::sort (points.begin(), points.end()); for (auto point : points) { std::clog << point[0] << " " << point[1] << " " << point[2] << " | "; } std::clog << ") -> " << "[" << w_simplex_d.filtration(f_simplex) << "] "; std::clog << std::endl; pts_fltr_dD[points] = w_simplex_d.filtration(f_simplex); } // Weighted alpha complex for 3D version Exact_weighted_alpha_complex_3d alpha_complex_3D_from_weighted_points(w_points_3); Gudhi::Simplex_tree<> w_simplex_3; BOOST_CHECK(alpha_complex_3D_from_weighted_points.create_complex(w_simplex_3)); std::clog << "Iterator on weighted alpha complex 3D simplices in the filtration order, with [filtration value]:" << std::endl; for (auto f_simplex : w_simplex_3.filtration_simplex_range()) { Points points; for (auto vertex : w_simplex_3.simplex_vertex_range(f_simplex)) { Bare_point_3 pt = alpha_complex_3D_from_weighted_points.get_point(vertex).point(); CGAL::NT_converter cgal_converter; points.push_back({cgal_converter(pt[0]), cgal_converter(pt[1]), cgal_converter(pt[2])}); } std::clog << " ( "; std::sort (points.begin(), points.end()); for (auto point : points) { std::clog << point[0] << " " << point[1] << " " << point[2] << " | "; } std::clog << ") -> " << "[" << w_simplex_3.filtration(f_simplex) << "] " << std::endl; pts_fltr_3d[points] = w_simplex_d.filtration(f_simplex); } // Compares structures auto d3_itr = pts_fltr_3d.begin(); auto dD_itr = pts_fltr_dD.begin(); for (; d3_itr != pts_fltr_3d.end() && dD_itr != pts_fltr_dD.end(); ++d3_itr) { if (d3_itr->first != dD_itr->first) { for(auto point : d3_itr->first) std::clog << point[0] << " " << point[1] << " " << point[2] << " | "; std::clog << " versus "; for(auto point : dD_itr->first) std::clog << point[0] << " " << point[1] << " " << point[2] << " | "; std::clog << std::endl; BOOST_CHECK(false); } // In safe mode, relative error is less than 1e-5 (can be changed with set_relative_precision_of_to_double) if (std::fabs(d3_itr->second - dD_itr->second) > 1e-5 * (std::fabs(d3_itr->second) + std::fabs(dD_itr->second))) { std::clog << d3_itr->second << " versus " << dD_itr->second << " diff " << std::fabs(d3_itr->second - dD_itr->second) << std::endl; BOOST_CHECK(false); } ++dD_itr; } }