/* This file is part of the Gudhi Library - https://gudhi.inria.fr/ - which is released under MIT. * See file LICENSE or go to https://gudhi.inria.fr/licensing/ for full license details. * Author(s): Pawel Dlotko * * Copyright (C) 2016 Inria * * Modification(s): * - YYYY/MM Author: Description of the modification */ #include #include #include #include #include using constant_scaling_function = Gudhi::Persistence_representations::constant_scaling_function; using Persistence_heat_maps = Gudhi::Persistence_representations::Persistence_heat_maps; int main(int argc, char** argv) { std::cout << "This program computes distance of persistence heat maps stored in files (the files needs to be " << "created beforehand).\n" << "The first parameter of a program is an integer p. The program compute L^p distance of the two heat " << "maps. For L^infty distance choose p = -1. \n" << "The remaining parameters of this program are names of files with persistence heat maps.\n"; if (argc < 3) { std::cout << "Wrong number of parameters, the program will now terminate \n"; return 1; } int pp = atoi(argv[1]); double p = std::numeric_limits::max(); if (pp != -1) { p = pp; } std::vector filenames; for (int i = 2; i < argc; ++i) { filenames.push_back(argv[i]); } std::vector maps; maps.reserve(filenames.size()); for (size_t file_no = 0; file_no != filenames.size(); ++file_no) { Persistence_heat_maps l; l.load_from_file(filenames[file_no]); maps.push_back(l); } // and now we will compute the scalar product of landscapes. // first we prepare an array: std::vector > distance(filenames.size()); for (size_t i = 0; i != filenames.size(); ++i) { std::vector v(filenames.size(), 0); distance[i] = v; } // and now we can compute the distances: for (size_t i = 0; i != filenames.size(); ++i) { for (size_t j = i; j != filenames.size(); ++j) { distance[i][j] = distance[j][i] = maps[i].distance(maps[j], p); } } // and now output the result to the screen and a file: std::ofstream out; out.open("distance.mps"); for (size_t i = 0; i != distance.size(); ++i) { for (size_t j = 0; j != distance.size(); ++j) { std::cout << distance[i][j] << " "; out << distance[i][j] << " "; } std::cout << std::endl; out << std::endl; } out.close(); std::cout << "Distance can be found in 'distance.mps' file\n"; return 0; }