project(Persistent_cohomology_examples)

add_executable(plain_homology plain_homology.cpp)

add_executable(persistence_from_simple_simplex_tree persistence_from_simple_simplex_tree.cpp)

add_executable(rips_persistence_step_by_step rips_persistence_step_by_step.cpp)
target_link_libraries(rips_persistence_step_by_step ${Boost_PROGRAM_OPTIONS_LIBRARY})

add_executable(rips_persistence_via_boundary_matrix rips_persistence_via_boundary_matrix.cpp)
target_link_libraries(rips_persistence_via_boundary_matrix ${Boost_PROGRAM_OPTIONS_LIBRARY})

add_executable(persistence_from_file persistence_from_file.cpp)
target_link_libraries(persistence_from_file ${Boost_PROGRAM_OPTIONS_LIBRARY})

if (TBB_FOUND)
  target_link_libraries(plain_homology ${TBB_LIBRARIES})
  target_link_libraries(persistence_from_simple_simplex_tree ${TBB_LIBRARIES})
  target_link_libraries(rips_persistence_step_by_step ${TBB_LIBRARIES})
  target_link_libraries(rips_persistence_via_boundary_matrix ${TBB_LIBRARIES})
  target_link_libraries(persistence_from_file ${TBB_LIBRARIES})
endif()

add_test(NAME Persistent_cohomology_example_plain_homology COMMAND $<TARGET_FILE:plain_homology>)
add_test(NAME Persistent_cohomology_example_from_simple_simplex_tree COMMAND $<TARGET_FILE:persistence_from_simple_simplex_tree>
    "1" "0")
add_test(NAME Persistent_cohomology_example_from_rips_step_by_step_on_tore_3D COMMAND $<TARGET_FILE:rips_persistence_step_by_step>
    "${CMAKE_SOURCE_DIR}/data/points/tore3D_1307.off" "-r" "0.25" "-m" "0.5" "-d" "3" "-p" "3")
add_test(NAME Persistent_cohomology_example_via_boundary_matrix COMMAND $<TARGET_FILE:rips_persistence_via_boundary_matrix>
    "${CMAKE_SOURCE_DIR}/data/points/Kl.off" "-r" "0.16" "-d" "3" "-p" "3" "-m" "100")
add_test(NAME Persistent_cohomology_example_from_file_3_2_0 COMMAND $<TARGET_FILE:persistence_from_file>
    "${CMAKE_SOURCE_DIR}/data/filtered_simplicial_complex/bunny_5000_complex.fsc" "-p" "2" "-m" "0")
add_test(NAME Persistent_cohomology_example_from_file_3_3_100 COMMAND $<TARGET_FILE:persistence_from_file>
    "${CMAKE_SOURCE_DIR}/data/filtered_simplicial_complex/bunny_5000_complex.fsc" "-p" "3" "-m" "100")

install(TARGETS plain_homology DESTINATION bin)
install(TARGETS persistence_from_simple_simplex_tree DESTINATION bin)
install(TARGETS rips_persistence_step_by_step DESTINATION bin)
install(TARGETS rips_persistence_via_boundary_matrix DESTINATION bin)
install(TARGETS persistence_from_file DESTINATION bin)

if(GMP_FOUND)
   if(GMPXX_FOUND)
      add_executable(rips_multifield_persistence rips_multifield_persistence.cpp )
      target_link_libraries(rips_multifield_persistence
          ${Boost_PROGRAM_OPTIONS_LIBRARY} ${GMPXX_LIBRARIES} ${GMP_LIBRARIES})
      if (TBB_FOUND)
        target_link_libraries(rips_multifield_persistence ${TBB_LIBRARIES})
      endif(TBB_FOUND)
      add_test(NAME Persistent_cohomology_example_multifield_2_71 COMMAND $<TARGET_FILE:rips_multifield_persistence>
          "${CMAKE_SOURCE_DIR}/data/points/tore3D_1307.off" "-r" "0.25" "-m" "0.5" "-d" "3" "-p" "2" "-q" "71")
      install(TARGETS rips_multifield_persistence DESTINATION bin)
   endif(GMPXX_FOUND)
endif(GMP_FOUND)

if (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.11.0)

  add_executable(custom_persistence_sort custom_persistence_sort.cpp)
  target_link_libraries(custom_persistence_sort ${CGAL_LIBRARY})

  if (TBB_FOUND)
    target_link_libraries(custom_persistence_sort ${TBB_LIBRARIES})
  endif(TBB_FOUND)
  add_test(NAME Persistent_cohomology_example_custom_persistence_sort COMMAND $<TARGET_FILE:custom_persistence_sort>)

  install(TARGETS custom_persistence_sort DESTINATION bin)

endif (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.11.0)