/* This file is part of the Gudhi Library. The Gudhi library * (Geometric Understanding in Higher Dimensions) is a generic C++ * library for computational topology. * * Author(s): Siargey Kachanovich * * Copyright (C) 2015 INRIA * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program. If not, see . */ #ifndef CONSTRUCT_CLOSEST_LANDMARK_TABLE_H_ #define CONSTRUCT_CLOSEST_LANDMARK_TABLE_H_ #include #include // for priority_queue<> #include // for pair<> #include #include #include namespace Gudhi { namespace witness_complex { /** * \ingroup witness_complex * \brief Construct the closest landmark tables for all witnesses. * \details Output a table 'knn', each line of which represents a witness and * consists of landmarks sorted by * euclidean distance from the corresponding witness. * * The type WitnessContainer is a random access range and * the type LandmarkContainer is a range. * The type KNearestNeighbors can be seen as * Witness_range>, where * Witness_range and Closest_landmark_range are random access ranges and * Vertex_handle is the label type of a vertex in a simplicial complex. * Closest_landmark_range needs to have push_back operation. */ template void construct_closest_landmark_table(WitnessContainer const &points, LandmarkContainer const &landmarks, KNearestNeighbours &knn) { int nbP = boost::size(points); assert(nbP >= boost::size(landmarks)); int dim = boost::size(*std::begin(points)); typedef std::pair dist_i; typedef bool (*comp)(dist_i, dist_i); knn = KNearestNeighbours(nbP); for (int points_i = 0; points_i < nbP; points_i++) { std::priority_queue, comp> l_heap([](dist_i j1, dist_i j2) { return j1.first > j2.first; }); typename LandmarkContainer::const_iterator landmarks_it; int landmarks_i = 0; for (landmarks_it = landmarks.begin(), landmarks_i = 0; landmarks_it != landmarks.end(); ++landmarks_it, landmarks_i++) { dist_i dist = std::make_pair(Euclidean_distance()(points[points_i], *landmarks_it), landmarks_i); l_heap.push(dist); } for (int i = 0; i < dim + 1; i++) { dist_i dist = l_heap.top(); knn[points_i].push_back(dist.second); l_heap.pop(); } } } } // namespace witness_complex } // namespace Gudhi #endif // CONSTRUCT_CLOSEST_LANDMARK_TABLE_H_