/* This file is part of the Gudhi Library - https://gudhi.inria.fr/ - which is released under MIT. * See file LICENSE or go to https://gudhi.inria.fr/licensing/ for full license details. * Author(s): Marc Glisse * * Copyright (C) 2020 Inria * * Modification(s): * - YYYY/MM Author: Description of the modification */ #include #include #include #include namespace py = pybind11; typedef py::array_t Dgm; // Get m[i,0] and m[i,1] as a pair static auto pairify(void* p, py::ssize_t h, py::ssize_t w) { return [=](py::ssize_t i){ char* birth = (char*)p + i * h; char* death = birth + w; return std::make_pair(*(double*)birth, *(double*)death); }; } inline auto numpy_to_range_of_pairs(py::array_t dgm) { py::buffer_info buf = dgm.request(); // shape (n,2) or (0) for empty if((buf.ndim!=2 || buf.shape[1]!=2) && (buf.ndim!=1 || buf.shape[0]!=0)) throw std::runtime_error("Diagram must be an array of size n x 2"); // In the case of shape (0), avoid reading non-existing strides[1] even if we won't use it. py::ssize_t stride1 = buf.ndim == 2 ? buf.strides[1] : 0; auto cnt = boost::counting_range(0, buf.shape[0]); return boost::adaptors::transform(cnt, pairify(buf.ptr, buf.strides[0], stride1)); // Be careful that the returned range cannot contain references to dead temporaries. }