from gudhi.point_cloud.timedelay import TimeDelayEmbedding import numpy as np def test_normal(): # Sample array ts = [1, 2, 3, 4, 5, 6, 7, 8, 9, 10] # Normal case. prep = TimeDelayEmbedding() pointclouds = prep(ts) assert (pointclouds[0] == np.array([1, 2, 3])).all() assert (pointclouds[1] == np.array([2, 3, 4])).all() assert (pointclouds[2] == np.array([3, 4, 5])).all() assert (pointclouds[3] == np.array([4, 5, 6])).all() assert (pointclouds[4] == np.array([5, 6, 7])).all() assert (pointclouds[5] == np.array([6, 7, 8])).all() assert (pointclouds[6] == np.array([7, 8, 9])).all() assert (pointclouds[7] == np.array([8, 9, 10])).all() # Delay = 3 prep = TimeDelayEmbedding(delay=3) pointclouds = prep(ts) assert (pointclouds[0] == np.array([1, 4, 7])).all() assert (pointclouds[1] == np.array([2, 5, 8])).all() assert (pointclouds[2] == np.array([3, 6, 9])).all() assert (pointclouds[3] == np.array([4, 7, 10])).all() # Skip = 3 prep = TimeDelayEmbedding(skip=3) pointclouds = prep(ts) assert (pointclouds[0] == np.array([1, 2, 3])).all() assert (pointclouds[1] == np.array([4, 5, 6])).all() assert (pointclouds[2] == np.array([7, 8, 9])).all() # Delay = 2 / Skip = 2 prep = TimeDelayEmbedding(delay=2, skip=2) pointclouds = prep(ts) assert (pointclouds[0] == np.array([1, 3, 5])).all() assert (pointclouds[1] == np.array([3, 5, 7])).all() assert (pointclouds[2] == np.array([5, 7, 9])).all() # Vector series ts = np.arange(0, 10).reshape(-1, 2) prep = TimeDelayEmbedding(dim=4) prep.fit([ts]) assert (prep.transform([ts])[0] == [[0, 1, 2, 3], [2, 3, 4, 5], [4, 5, 6, 7], [6, 7, 8, 9]]).all()