from gudhi import WitnessComplex, StrongWitnessComplex, SimplexTree """ This file is part of the Gudhi Library - https://gudhi.inria.fr/ - which is released under MIT. See file LICENSE or go to https://gudhi.inria.fr/licensing/ for full license details. Author(s): Vincent Rouvreau Copyright (C) 2016 Inria Modification(s): - YYYY/MM Author: Description of the modification """ __author__ = "Vincent Rouvreau" __copyright__ = "Copyright (C) 2016 Inria" __license__ = "MIT" def test_empty_witness_complex(): witness = WitnessComplex() assert witness.__is_defined() == False def test_witness_complex(): nearest_landmark_table = [ [[0, 0], [1, 1], [2, 2], [3, 3], [4, 4]], [[1, 0], [2, 1], [3, 2], [4, 3], [0, 4]], [[2, 0], [3, 1], [4, 2], [0, 3], [1, 4]], [[3, 0], [4, 1], [0, 2], [1, 3], [2, 4]], [[4, 0], [0, 1], [1, 2], [2, 3], [3, 4]], ] witness_complex = WitnessComplex(nearest_landmark_table=nearest_landmark_table) simplex_tree = witness_complex.create_simplex_tree(max_alpha_square=4.1) assert simplex_tree.num_vertices() == 5 assert simplex_tree.num_simplices() == 31 simplex_tree = witness_complex.create_simplex_tree( max_alpha_square=4.1, limit_dimension=2 ) assert simplex_tree.num_vertices() == 5 assert simplex_tree.num_simplices() == 25 def test_strong_witness_complex(): nearest_landmark_table = [ [[0, 0], [1, 1], [2, 2], [3, 3], [4, 4]], [[1, 0], [2, 1], [3, 2], [4, 3], [0, 4]], [[2, 0], [3, 1], [4, 2], [0, 3], [1, 4]], [[3, 0], [4, 1], [0, 2], [1, 3], [2, 4]], [[4, 0], [0, 1], [1, 2], [2, 3], [3, 4]], ] strong_witness_complex = StrongWitnessComplex( nearest_landmark_table=nearest_landmark_table ) simplex_tree = strong_witness_complex.create_simplex_tree(max_alpha_square=4.1) assert simplex_tree.num_vertices() == 5 assert simplex_tree.num_simplices() == 31 simplex_tree = strong_witness_complex.create_simplex_tree( max_alpha_square=4.1, limit_dimension=2 ) assert simplex_tree.num_vertices() == 5 assert simplex_tree.num_simplices() == 25