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|
From: Gard Spreemann <gspr@nonempty.org>
Date: Wed, 25 Sep 2019 15:12:45 +0200
Subject: Disable tests that use DFSG-deleted data files.
---
src/Nerve_GIC/example/CMakeLists.txt | 5 ----
src/Nerve_GIC/utilities/CMakeLists.txt | 8 ------
src/Persistent_cohomology/example/CMakeLists.txt | 12 ---------
src/Simplex_tree/example/CMakeLists.txt | 2 --
src/python/CMakeLists.txt | 31 +-----------------------
5 files changed, 1 insertion(+), 57 deletions(-)
diff --git a/src/Nerve_GIC/example/CMakeLists.txt b/src/Nerve_GIC/example/CMakeLists.txt
index 4b0f467..110212d 100644
--- a/src/Nerve_GIC/example/CMakeLists.txt
+++ b/src/Nerve_GIC/example/CMakeLists.txt
@@ -12,14 +12,9 @@ if (NOT CGAL_VERSION VERSION_LESS 4.11.0)
# Copy files for not to pollute sources when testing
file(COPY "${CMAKE_SOURCE_DIR}/data/points/tore3D_1307.off" DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/)
- file(COPY "${CMAKE_SOURCE_DIR}/data/points/COIL_database/lucky_cat.off" DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/)
- file(COPY "${CMAKE_SOURCE_DIR}/data/points/COIL_database/lucky_cat_PCA1" DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/)
add_test(NAME Nerve_GIC_example_CoordGIC COMMAND $<TARGET_FILE:CoordGIC>
"${CMAKE_CURRENT_BINARY_DIR}/tore3D_1307.off" "0")
- add_test(NAME Nerve_GIC_example_FuncGIC COMMAND $<TARGET_FILE:FuncGIC>
- "${CMAKE_CURRENT_BINARY_DIR}/lucky_cat.off"
- "${CMAKE_CURRENT_BINARY_DIR}/lucky_cat_PCA1")
endif (NOT CGAL_VERSION VERSION_LESS 4.11.0)
diff --git a/src/Nerve_GIC/utilities/CMakeLists.txt b/src/Nerve_GIC/utilities/CMakeLists.txt
index 65a08d9..3f16db9 100644
--- a/src/Nerve_GIC/utilities/CMakeLists.txt
+++ b/src/Nerve_GIC/utilities/CMakeLists.txt
@@ -11,14 +11,6 @@ if (NOT CGAL_VERSION VERSION_LESS 4.11.0)
endif()
file(COPY KeplerMapperVisuFromTxtFile.py km.py DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/)
- # Copy files for not to pollute sources when testing
- file(COPY "${CMAKE_SOURCE_DIR}/data/points/human.off" DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/)
-
- add_test(NAME Nerve_GIC_utilities_nerve COMMAND $<TARGET_FILE:Nerve>
- "human.off" "2" "10" "0.3")
-
- add_test(NAME Nerve_GIC_utilities_VoronoiGIC COMMAND $<TARGET_FILE:VoronoiGIC>
- "human.off" "100")
install(TARGETS Nerve DESTINATION bin)
install(TARGETS VoronoiGIC DESTINATION bin)
diff --git a/src/Persistent_cohomology/example/CMakeLists.txt b/src/Persistent_cohomology/example/CMakeLists.txt
index c68c652..9a15a89 100644
--- a/src/Persistent_cohomology/example/CMakeLists.txt
+++ b/src/Persistent_cohomology/example/CMakeLists.txt
@@ -33,18 +33,6 @@ if(TARGET Boost::program_options)
"${CMAKE_SOURCE_DIR}/data/points/Kl.off" "-r" "0.16" "-d" "3" "-p" "3" "-m" "100")
endif()
-if(TARGET Boost::program_options)
- add_executable(persistence_from_file persistence_from_file.cpp)
- target_link_libraries(persistence_from_file Boost::program_options)
- if (TBB_FOUND)
- target_link_libraries(persistence_from_file ${TBB_LIBRARIES})
- endif()
- add_test(NAME Persistent_cohomology_example_from_file_3_2_0 COMMAND $<TARGET_FILE:persistence_from_file>
- "${CMAKE_SOURCE_DIR}/data/filtered_simplicial_complex/bunny_5000_complex.fsc" "-p" "2" "-m" "0")
- add_test(NAME Persistent_cohomology_example_from_file_3_3_100 COMMAND $<TARGET_FILE:persistence_from_file>
- "${CMAKE_SOURCE_DIR}/data/filtered_simplicial_complex/bunny_5000_complex.fsc" "-p" "3" "-m" "100")
-endif()
-
if(GMP_FOUND)
if(GMPXX_FOUND)
if(TARGET Boost::program_options)
diff --git a/src/Simplex_tree/example/CMakeLists.txt b/src/Simplex_tree/example/CMakeLists.txt
index 73b2c6f..a6dd0b1 100644
--- a/src/Simplex_tree/example/CMakeLists.txt
+++ b/src/Simplex_tree/example/CMakeLists.txt
@@ -28,8 +28,6 @@ if(GMP_FOUND AND NOT CGAL_VERSION VERSION_LESS 4.11.0)
if (TBB_FOUND)
target_link_libraries(Simplex_tree_example_alpha_shapes_3_from_off ${TBB_LIBRARIES})
endif()
- add_test(NAME Simplex_tree_example_alpha_shapes_3_from_off COMMAND $<TARGET_FILE:Simplex_tree_example_alpha_shapes_3_from_off>
- "${CMAKE_SOURCE_DIR}/data/points/bunny_5000.off")
endif()
diff --git a/src/python/CMakeLists.txt b/src/python/CMakeLists.txt
index 5c1402a..a45e13a 100644
--- a/src/python/CMakeLists.txt
+++ b/src/python/CMakeLists.txt
@@ -386,36 +386,7 @@ if(PYTHONINTERP_FOUND)
add_gudhi_py_test(test_bottleneck_distance)
endif()
- # Cover complex
- file(COPY ${CMAKE_SOURCE_DIR}/data/points/human.off DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/)
- file(COPY ${CMAKE_SOURCE_DIR}/data/points/COIL_database/lucky_cat.off DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/)
- file(COPY ${CMAKE_SOURCE_DIR}/data/points/COIL_database/lucky_cat_PCA1 DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/)
- add_test(NAME cover_complex_nerve_example_py_test
- WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
- COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
- ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/nerve_of_a_covering.py"
- -f human.off -c 2 -r 10 -g 0.3)
-
- add_test(NAME cover_complex_coordinate_gic_example_py_test
- WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
- COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
- ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/coordinate_graph_induced_complex.py"
- -f human.off -c 0 -v)
-
- add_test(NAME cover_complex_functional_gic_example_py_test
- WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
- COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
- ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/functional_graph_induced_complex.py"
- -o lucky_cat.off
- -f lucky_cat_PCA1 -v)
-
- add_test(NAME cover_complex_voronoi_gic_example_py_test
- WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
- COMMAND ${CMAKE_COMMAND} -E env "PYTHONPATH=${CMAKE_CURRENT_BINARY_DIR}"
- ${PYTHON_EXECUTABLE} "${CMAKE_CURRENT_SOURCE_DIR}/example/voronoi_graph_induced_complex.py"
- -f human.off -n 700 -v)
-
- add_gudhi_py_test(test_cover_complex)
+
endif (NOT CGAL_VERSION VERSION_LESS 4.11.0)
if (NOT CGAL_WITH_EIGEN3_VERSION VERSION_LESS 4.11.0)
|
