1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
|
#include <gudhi/Sparse_rips_complex.h>
#include <gudhi/Simplex_tree.h>
#include <gudhi/distance_functions.h>
#include <iostream>
#include <vector>
int main() {
using Point = std::vector<double>;
using Simplex_tree = Gudhi::Simplex_tree<Gudhi::Simplex_tree_options_fast_persistence>;
using Filtration_value = Simplex_tree::Filtration_value;
using Sparse_rips = Gudhi::rips_complex::Sparse_rips_complex<Filtration_value>;
Point points[] = {{1.0, 1.0}, {7.0, 0.0}, {4.0, 6.0}, {9.0, 6.0}, {0.0, 14.0}, {2.0, 19.0}, {9.0, 17.0}};
// ----------------------------------------------------------------------------
// Init from Euclidean points
// ----------------------------------------------------------------------------
double epsilon = 2; // very rough, no guarantees
Sparse_rips sparse_rips(points, Gudhi::Euclidean_distance(), epsilon);
Simplex_tree stree;
sparse_rips.create_complex(stree, 10);
// ----------------------------------------------------------------------------
// Display information about the complex
// ----------------------------------------------------------------------------
std::clog << "Sparse Rips complex is of dimension " << stree.dimension() << " - " << stree.num_simplices()
<< " simplices - " << stree.num_vertices() << " vertices." << std::endl;
}
|
