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/* This file is part of the Gudhi Library. The Gudhi library
* (Geometric Understanding in Higher Dimensions) is a generic C++
* library for computational topology.
*
* Author(s): Vincent Rouvreau
*
* Copyright (C) 2016 Inria
*
* Modification(s):
* - YYYY/MM Author: Description of the modification
*/
#include <gudhi/reader_utils.h>
#include <iostream>
#include <string>
#include <vector>
#define BOOST_TEST_DYN_LINK
#define BOOST_TEST_MODULE "distance_matrix_reader"
#include <boost/test/unit_test.hpp>
using Distance_matrix = std::vector<std::vector<double>>;
BOOST_AUTO_TEST_CASE( lower_triangular_distance_matrix )
{
Distance_matrix from_lower_triangular;
// Read lower_triangular_distance_matrix.csv file where the separator is a ','
from_lower_triangular = Gudhi::read_lower_triangular_matrix_from_csv_file<double>("lower_triangular_distance_matrix.csv",
',');
for (auto& i : from_lower_triangular) {
for (auto j : i) {
std::cout << j << " ";
}
std::cout << std::endl;
}
std::cout << "from_lower_triangular size = " << from_lower_triangular.size() << std::endl;
BOOST_CHECK(from_lower_triangular.size() == 5);
for (std::size_t i = 0; i < from_lower_triangular.size(); i++) {
std::cout << "from_lower_triangular[" << i << "] size = " << from_lower_triangular[i].size() << std::endl;
BOOST_CHECK(from_lower_triangular[i].size() == i);
}
std::vector<double> expected = {1};
BOOST_CHECK(from_lower_triangular[1] == expected);
expected = {2,3};
BOOST_CHECK(from_lower_triangular[2] == expected);
expected = {4,5,6};
BOOST_CHECK(from_lower_triangular[3] == expected);
expected = {7,8,9,10};
BOOST_CHECK(from_lower_triangular[4] == expected);
}
BOOST_AUTO_TEST_CASE( full_square_distance_matrix )
{
Distance_matrix from_full_square;
// Read full_square_distance_matrix.csv file where the separator is the default one ';'
from_full_square = Gudhi::read_lower_triangular_matrix_from_csv_file<double>("full_square_distance_matrix.csv");
for (auto& i : from_full_square) {
for (auto j : i) {
std::cout << j << " ";
}
std::cout << std::endl;
}
std::cout << "from_full_square size = " << from_full_square.size() << std::endl;
BOOST_CHECK(from_full_square.size() == 7);
for (std::size_t i = 0; i < from_full_square.size(); i++) {
std::cout << "from_full_square[" << i << "] size = " << from_full_square[i].size() << std::endl;
BOOST_CHECK(from_full_square[i].size() == i);
}
}
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