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path: root/src/cython/example/sparse_rips_persistence_diagram.py
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#!/usr/bin/env python

import gudhi

""" This file is part of the Gudhi Library - https://gudhi.inria.fr/ - which is released under MIT.
    See file LICENSE or go to https://gudhi.inria.fr/licensing/ for full license details.
    Author(s):       Vincent Rouvreau

    Copyright (C) 2018 Inria

    Modification(s):
      - YYYY/MM Author: Description of the modification
"""

__author__ = "Marc Glisse"
__copyright__ = "Copyright (C) 2018 Inria"
__license__ = "MIT"

print("#####################################################################")
print("Sparse RipsComplex creation from points")
rips = gudhi.RipsComplex(
    points=[[0, 0], [0, 0.1], [1, 0], [0, 1], [1, 1]], max_edge_length=42, sparse=0.5
)

simplex_tree = rips.create_simplex_tree(max_dimension=2)


diag = simplex_tree.persistence(homology_coeff_field=2, min_persistence=0)
print("diag=", diag)

pplot = gudhi.plot_persistence_diagram(diag)
pplot.show()