summaryrefslogtreecommitdiff
path: root/src/python/example/gudhi_graphical_tools_example.py
blob: 37ecbf53abcf1026e5faf292c9165a3a345bc25d (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
#!/usr/bin/env python

import matplotlib.pyplot as plot
import gudhi

""" This file is part of the Gudhi Library - https://gudhi.inria.fr/ - which is released under MIT.
    See file LICENSE or go to https://gudhi.inria.fr/licensing/ for full license details.
    Author(s):       Vincent Rouvreau

    Copyright (C) 2016 Inria

    Modification(s):
      - YYYY/MM Author: Description of the modification
"""

__author__ = "Vincent Rouvreau"
__copyright__ = "Copyright (C) 2016 Inria"
__license__ = "MIT"

print("#####################################################################")
print("Show barcode persistence example")

persistence = [
    (2, (1.0, float("inf"))),
    (1, (1.4142135623730951, float("inf"))),
    (1, (1.4142135623730951, float("inf"))),
    (0, (0.0, float("inf"))),
    (0, (0.0, 1.0)),
    (0, (0.0, 1.0)),
    (0, (0.0, 1.0)),
]
gudhi.plot_persistence_barcode(persistence)
plot.show()

print("#####################################################################")
print("Show diagram persistence example")

gudhi.plot_persistence_diagram(persistence)
plot.show()

print("#####################################################################")
print("Show diagram persistence example with a confidence band")

gudhi.plot_persistence_diagram(persistence, band=0.2)
plot.show()

print("#####################################################################")
print("Show barcode and diagram persistence side by side example")
fig, axes = plot.subplots(nrows=1, ncols=2)
gudhi.plot_persistence_barcode(persistence, axes = axes[0])
gudhi.plot_persistence_diagram(persistence, axes = axes[1])
fig.suptitle("barcode versus diagram")
plot.show()